RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 LCA5LO95447 670 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ADRB2P07550 413 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 FAM153BP0C7A2 387 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 FAM153CQ494X1 144 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 CAPRIN2Q6IMN6 1127 aaKnown RBP10.54□□□□□ -0.72
TRAF1-202ENST00000540010 CEP120Q8N960 986 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 CPA5Q8WXQ8 436 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 BORCS6Q96GS4 357 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 FAM161BQ96MY7 647 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 KLF6Q99612 283 aaPredicted RBP10.54□□□□□ -0.72
TRAF1-202ENST00000540010 WNT8AQ9H1J5 351 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 SIX2Q9NPC8 291 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 XPNPEP1Q9NQW7 623 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 FAM153AQ9UHL3 310 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 UTRNP46939 3433 aa10.54□□□□□ -0.72
TRAF1-202ENST00000540010 POLR2AP24928 1970 aaKnown RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 CCDC195A0A1B0GUA6 201 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 FOXN3O00409 490 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 FARP2O94887 1054 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 RFX1P22670 979 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 CDR2Q01850 454 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 ASTE1Q2TB18 679 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 C2CD6Q53TS8 623 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 PACS2Q86VP3 889 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 LRRC43Q8N309 656 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 FAF2Q96CS3 445 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 TOPORSQ9NS56 1045 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 IQANK1A0A1B0GTG1 560 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 ASB14A6NK59 587 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 P4HA2O15460 535 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 PJA2O43164 708 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 PRPSAP2O60256 369 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 PFDN1O60925 122 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 HAUS5O94927 633 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 CA8P35219 290 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 RFC5P40937 340 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 ARSEP51690 589 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 ARL4CP56559 192 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 C12orf56Q8IXR9 622 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 C2orf69Q8N8R5 385 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 FBXL13Q8NEE6 735 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 FBXO25Q8TCJ0 367 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 CCDC124Q96CT7 223 aaKnown RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 TARS2Q9BW92 718 aaKnown RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 OSGEPQ9NPF4 335 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 STOML1Q9UBI4 398 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 INPP5FQ9Y2H2 1132 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 USP15Q9Y4E8 981 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 AGTP01019 485 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 CETPP11597 493 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 AMPD2Q01433 879 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 SLFN12LQ6IEE8 588 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 LONP2Q86WA8 852 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 LRRC71Q8N4P6 559 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 AFAP1L2Q8N4X5 818 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 PSPC1Q8WXF1 523 aaKnown RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 RAPGEF5Q92565 580 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 ERP27Q96DN0 273 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 SNF8Q96H20 258 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 SGSM3Q96HU1 749 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 L3MBTL3Q96JM7 780 aaPredicted RBP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 RBM15Q96T37 977 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAF1-202ENST00000540010 KIAA1586Q9HCI6 787 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 BCAP29Q9UHQ4 241 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 KCNH4Q9UQ05 1017 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 SCINQ9Y6U3 715 aa10.53□□□□□ -0.72
TRAF1-202ENST00000540010 CCT8L1PA6NM43 557 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 PDHXO00330 501 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 MAP2K7O14733 419 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 KRT37O76014 449 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 ITGA4P13612 1032 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 ARFIP2P53365 341 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 LRRC34Q8IZ02 419 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 TMEM35BQ8NCS4 154 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 ASAP3Q8TDY4 903 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 ANKRD36BP1Q96IX9 119 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 HEXIM2Q96MH2 286 aaKnown RBP10.52□□□□□ -0.72
TRAF1-202ENST00000540010 MED10Q9BTT4 135 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 THAP2Q9H0W7 228 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 CYP4F11Q9HBI6 524 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 ARL2BPQ9Y2Y0 163 aa10.52□□□□□ -0.72
TRAF1-202ENST00000540010 MAFBQ9Y5Q3 323 aaPredicted RBP10.52□□□□□ -0.72
TRAF1-202ENST00000540010 CFAP73A6NFT4 308 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 KIF3CO14782 793 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 MX2P20592 715 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 PRKCIP41743 596 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 NAMPTP43490 491 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 CYB5D1Q6P9G0 228 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 ARHGEF19Q8IW93 802 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 PARD3BQ8TEW8 1205 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 FAM81BQ96LP2 452 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 TMEM8AQ9HCN3 771 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 RBAK-RBAKDNI3L0D1 243 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 CAND2O75155 1236 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 MYBL2P10244 700 aa10.52□□□□□ -0.73
TRAF1-202ENST00000540010 GARTP22102 1010 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms