RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LETM2Q2VYF4 491 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 PLEKHG4Q58EX7 1191 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TSHZ1Q6ZSZ6 1077 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 NET1Q7Z628 596 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 OLIG1Q8TAK6 271 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 GMCL1Q96IK5 515 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 MPHOSPH6Q99547 160 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 NPHS2Q9NP85 383 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 ARHGEF38Q9NXL2 777 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 SMG5Q9UPR3 1016 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TMEM98Q9Y2Y6 226 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TRIM43BA6NCK2 446 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TMEM247A6NEH6 219 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 SPAG7O75391 227 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 ASNSP08243 561 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TROVE2P10155 538 aaKnown RBP eCLIP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 ALOX15P16050 662 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 PORP16435 677 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TAL1P17542 331 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 CETN2P41208 172 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 SERPINB8P50452 374 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 ASPHQ12797 758 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 DGKZQ13574 1117 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 SEL1L2Q5TEA6 688 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TRABD2AQ86V40 505 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 PDSS2Q86YH6 399 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 SLC15A3Q8IY34 581 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 C12orf50Q8NA57 414 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 SLCO2A1Q92959 643 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 PRICKLE1Q96MT3 831 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 TTC25Q96NG3 672 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 FAIMQ9NVQ4 179 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 KANSL3Q9P2N6 904 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 ANKFY1Q9P2R3 1169 aa11.97□□□□□ -0.49
SEMA4D-221ENST00000537934 PNMA6FA0A0J9YX94 578 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ZBTB5O15062 677 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 BUD23O43709 281 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 AP1G1O43747 822 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 RARBP10826 455 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 BMP3P12645 472 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 CPA3P15088 417 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ABCB4P21439 1286 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 HOXD12P35452 270 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 KCNJ1P48048 391 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 VPS41P49754 854 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ADRM1Q16186 407 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 APOBEC3FQ8IUX4 373 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ZBED8Q8IZ13 594 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 DNAJC19Q96DA6 116 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ZSWIM1Q9BR11 485 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 USP29Q9HBJ7 922 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 WDR46O15213 610 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 MAGEB3O15480 346 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 UQCRBP14927 111 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 CHRNB2P17787 502 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 HADHBP55084 474 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 CAV1Q03135 178 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 TMED2Q15363 201 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 QRICH1Q2TAL8 776 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 TRMT5Q32P41 509 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 C11orf63Q6NUN7 778 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 C1orf228Q6PIY5 440 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 RBM44Q6ZP01 1051 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 KRT25Q7Z3Z0 450 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 FRMD5Q7Z6J6 570 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 RASSF3Q86WH2 238 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 GLYCTKQ8IVS8 523 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 OR6Y1Q8NGX8 325 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 FNDC8Q8TC99 324 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ZNF75CPQ92670 426 aaPredicted RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 KRT35Q92764 455 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ARHGEF26Q96DR7 871 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 ZNF341Q9BYN7 854 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 GPAMQ9HCL2 828 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 SIX2Q9NPC8 291 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 HEY2Q9UBP5 337 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 AJAP1Q9UKB5 411 aaPredicted RBP11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 COG5Q9UP83 839 aa11.96□□□□□ -0.49
SEMA4D-221ENST00000537934 FRMPD4Q14CM0 1322 aa11.96□□□□□ -0.5
SEMA4D-221ENST00000537934 STAT1P42224 750 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 RPL5P46777 297 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 RPL26P61254 145 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 TBL3Q12788 808 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 ORC2Q13416 577 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 PRKG1Q13976 671 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 EPHA7Q15375 998 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 SIX1Q15475 284 aaPredicted RBP11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 CCDC62Q6P9F0 684 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 KLHDC10Q6PID8 442 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 ADGRG6Q86SQ4 1221 aa11.95□□□□□ -0.5
SEMA4D-221ENST00000537934 LRRC6Q86X45 466 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms