RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 LRG1P02750 347 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 RHOP08100 348 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 ANP32AP39687 249 aaKnown RBP14.16□□□□□ -0.14
PRKDC-206ENST00000536429 PABPC1LQ4VXU2 614 aaKnown RBP14.16□□□□□ -0.14
PRKDC-206ENST00000536429 SLC39A12Q504Y0 691 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 TMEM31Q5JXX7 168 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 CENPPQ6IPU0 288 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 RTL10Q7L3V2 364 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 METTL23Q86XA0 190 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 GUF1Q8N442 669 aaKnown RBP14.16□□□□□ -0.14
PRKDC-206ENST00000536429 SPATA20Q8TB22 786 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 TMEM174Q8WUU8 243 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 ING5Q8WYH8 240 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 CCDC47Q96A33 483 aaKnown RBP14.16□□□□□ -0.14
PRKDC-206ENST00000536429 TCEAL4Q96EI5 215 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 HPDLQ96IR7 371 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 DNAJC25Q9H1X3 360 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 GDAP2Q9NXN4 497 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 EPS15L1Q9UBC2 864 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
PRKDC-206ENST00000536429 TSC2P49815 1807 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 CALUO43852 315 aaPredicted RBP14.15□□□□□ -0.14
PRKDC-206ENST00000536429 AKAP3O75969 853 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 LAMP2P13473 410 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 ACAT1P24752 427 aaKnown RBP14.15□□□□□ -0.14
PRKDC-206ENST00000536429 CCR2P41597 374 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 SOWAHAQ2M3V2 549 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 ZCWPW2Q504Y3 356 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 C1orf220Q5T0J3 134 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 TDRD10Q5VZ19 366 aaKnown RBP14.15□□□□□ -0.14
PRKDC-206ENST00000536429 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 TRIM67Q6ZTA4 783 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 LIMS2Q7Z4I7 341 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 PARD3BQ8TEW8 1205 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 KBTBD7Q8WVZ9 684 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 FGF13Q92913 245 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 EEF2KMTQ96G04 330 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 TIGD1Q96MW7 591 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 CORO1BQ9BR76 489 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 OXCT2Q9BYC2 517 aaPredicted RBP14.15□□□□□ -0.14
PRKDC-206ENST00000536429 KCNK12Q9HB15 430 aa14.15□□□□□ -0.14
PRKDC-206ENST00000536429 NARSO43776 548 aaKnown RBP14.14□□□□□ -0.15
PRKDC-206ENST00000536429 HUS1O60921 280 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 CEBPBP17676 345 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 NR2F2P24468 414 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 PRCPP42785 496 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 PMS1P54277 932 aaKnown RBP14.14□□□□□ -0.15
PRKDC-206ENST00000536429 MYL6P60660 151 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 CLDN10P78369 228 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 PRSS36Q5K4E3 855 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 ISM2Q6H9L7 571 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 HFE2Q6ZVN8 426 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 NPAS3Q8IXF0 933 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 ADGRF2Q8IZF7 708 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 THEM5Q8N1Q8 247 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 TOP6BLQ8N6T0 577 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 ASIC4Q96FT7 647 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 RPP25Q9BUL9 199 aaKnown RBP14.14□□□□□ -0.15
PRKDC-206ENST00000536429 XYLT2Q9H1B5 865 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 DDX43Q9NXZ2 648 aaKnown RBP14.14□□□□□ -0.15
PRKDC-206ENST00000536429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.14□□□□□ -0.15
PRKDC-206ENST00000536429 CDH7Q9ULB5 785 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 MAFFQ9ULX9 164 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 SORCS3Q9UPU3 1222 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 NME7Q9Y5B8 376 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 NOTCH4Q99466 2003 aa14.14□□□□□ -0.15
PRKDC-206ENST00000536429 DOCK8Q8NF50 2099 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 TMEM221A6NGB7 291 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 M0R296 226 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 GABRDO14764 452 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 KINO60870 393 aaKnown RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 PRPF40AO75400 957 aaKnown RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 MOSPD3O75425 235 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 KIF20AO95235 890 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 VNN1O95497 513 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 PDGFBP01127 241 aaPredicted RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 C4BPAP04003 597 aaKnown RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 GJA1P17302 382 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 PTPN2P17706 415 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 LMO2P25791 158 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 MYO1EQ12965 1108 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 MTMR3Q13615 1198 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 HTR4Q13639 388 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 NFIL3Q16649 462 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 PARM1Q6UWI2 310 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 CCDC34Q96HJ3 373 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 GSDMAQ96QA5 445 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 PKMYT1Q99640 499 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 SEPT5Q99719 369 aaPredicted RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 LPIN3Q9BQK8 851 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 MRPL45Q9BRJ2 306 aaKnown RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 MAN1B1Q9UKM7 699 aa14.13□□□□□ -0.15
PRKDC-206ENST00000536429 MRPS23Q9Y3D9 190 aaKnown RBP14.13□□□□□ -0.15
PRKDC-206ENST00000536429 MYO10Q9HD67 2058 aa14.12□□□□□ -0.15
PRKDC-206ENST00000536429 MYBPHLA2RUH7 354 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms