RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 K7ENM7 598 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 IPO5O00410 1097 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 FSCN2O14926 492 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 DHX15O43143 795 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 PPIP5K2O43314 1243 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 RIPK2O43353 540 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ECE2O60344 883 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SGPL1O95470 568 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 FAM157BP0CG42 384 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 RARAP10276 462 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 PYGMP11217 842 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 PLS3P13797 630 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 CHN1P15882 459 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 COMTP21964 271 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 GRNP28799 593 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ECE1P42892 770 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 MARCKSL1P49006 195 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 RARRES1P49788 294 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 GPC3P51654 580 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 PLTPP55058 493 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 IGBP1P78318 339 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 DLG4P78352 724 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 FMO1Q01740 532 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 PRPF4BQ13523 1007 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 UBAP2LQ14157 1087 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SLC29A2Q14542 456 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SLMAPQ14BN4 828 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ARHGAP44Q17R89 818 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SPRED3Q2MJR0 410 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 PREPLQ4J6C6 727 aaPredicted RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ODF2Q5BJF6 829 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ARTNQ5T4W7 220 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SEL1L2Q5TEA6 688 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 GKAP1Q5VSY0 366 aaPredicted RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 AADACL2Q6P093 401 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SLC30A10Q6XR72 485 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SYDE1Q6ZW31 735 aaPredicted RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 TRMT10CQ7L0Y3 403 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 MIER3Q7Z3K6 550 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC91Q7Z6B0 441 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 RBBP6Q7Z6E9 1792 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC50Q8IVM0 306 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SYCP3Q8IZU3 236 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SAMD3Q8N6K7 520 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 XXYLT1Q8NBI6 393 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC197Q8NCU1 140 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SLC17A8Q8NDX2 589 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ACER1Q8TDN7 264 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 HVCN1Q96D96 273 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 C18orf8Q96DM3 657 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 BTBD6Q96KE9 485 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 KREMEN1Q96MU8 473 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 IWS1Q96ST2 819 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 GMLQ99445 158 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 NCAPGQ9BPX3 1015 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 LXNQ9BS40 222 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 TACO1Q9BSH4 297 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 TRIM31Q9BZY9 425 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ZCCHC2Q9C0B9 1178 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 TMEM117Q9H0C3 514 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 STMN4Q9H169 189 aaPredicted RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 TDRD3Q9H7E2 651 aaKnown RBP6.12□□□□□ -1.43
VPS33A-203ENST00000536212 ZFP64Q9NPA5 681 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 KLC4Q9NSK0 619 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 WHRNQ9P202 907 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 CTTNBP2NLQ9P2B4 639 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 UVRAGQ9P2Y5 699 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 FEM1BQ9UK73 627 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 GTF3C4Q9UKN8 822 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 MTUS1Q9ULD2 1270 aa6.12□□□□□ -1.43
VPS33A-203ENST00000536212 PASKQ96RG2 1323 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 hCG_2014768A0A024R1R8 64 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ANKRD63C9JTQ0 380 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ATXN7O15265 892 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 TP73O15350 636 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 RGS16O15492 202 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CHMP2AO43633 222 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 KIF1CO43896 1103 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 GRIN3BO60391 1043 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CTNND1O60716 968 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 LRRN2O75325 713 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 TCEA3O75764 348 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 EGFRP00533 1210 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 OAS1P00973 400 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ADRB2P07550 413 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MMEP08473 750 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 EPXP11678 715 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ITGB5P18084 799 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 GTF2H1P32780 548 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 COPB2P35606 906 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 GATA4P43694 442 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MXI1P50539 228 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MNAT1P51948 309 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 RBM5P52756 815 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MFAP3P55082 362 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 RWDD2BP57060 319 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 IFI35P80217 286 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CDR2Q01850 454 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms