RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 STK38Q15208 465 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 TEAD2Q15562 447 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 SLC39A12Q504Y0 691 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 FAM173BQ6P4H8 233 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 VITQ6UXI7 678 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 MFSD6LQ8IWD5 586 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 CCDC65Q8IXS2 484 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 SHKBP1Q8TBC3 707 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 FAM200AQ8TCP9 573 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 SPPL2BQ8TCT7 592 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
RTN3-207ENST00000536011 CLDN23Q96B33 292 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 DNAJC19Q96DA6 116 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 SEPT5Q99719 369 aaPredicted RBP14.17□□□□□ -0.14
RTN3-207ENST00000536011 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
RTN3-207ENST00000536011 FAM213AQ9BRX8 229 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 STRA6Q9BX79 667 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 CUEDC2Q9H467 287 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 HEBP1Q9NRV9 189 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 ZMYM5Q9UJ78 669 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 MTMR6Q9Y217 621 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 R4GN57 208 aa14.17□□□□□ -0.14
RTN3-207ENST00000536011 ZNF292O60281 2723 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 TSC2P49815 1807 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 A0A1W2PRU2 124 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 FRMD3A2A2Y4 597 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 KPNA7A9QM74 516 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 KIAA0391O15091 583 aaKnown RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 KINO60870 393 aaKnown RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 MOSPD3O75425 235 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 VNN2O95498 520 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 CD72P21854 359 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 ADSSP30520 456 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 NASPP49321 788 aaPredicted RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 TFAMQ00059 246 aaKnown RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 TSPY1Q01534 308 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 TAF12Q16514 161 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 TMC8Q8IU68 726 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 BRSK2Q8IWQ3 736 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 DCP1BQ8IZD4 617 aaKnown RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 TMEM130Q8N3G9 435 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 ATAD1Q8NBU5 361 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 OR10T2Q8NGX3 314 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 CSGALNACT1Q8TDX6 532 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 ZSWIM3Q96MP5 696 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 ZNF396Q96N95 335 aaPredicted RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 USP28Q96RU2 1077 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 BACH2Q9BYV9 841 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 ZCWPW1Q9H0M4 648 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 TNMDQ9H2S6 317 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 PANK4Q9NVE7 773 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 RBAKQ9NYW8 714 aaPredicted RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 TBC1D7Q9P0N9 293 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 SLC27A5Q9Y2P5 690 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 R3HCC1Q9Y3T6 440 aaKnown RBP14.16□□□□□ -0.14
RTN3-207ENST00000536011 PCDHGA2Q9Y5H1 932 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 ANK1P16157 1881 aa14.16□□□□□ -0.14
RTN3-207ENST00000536011 SPTBN4Q9H254 2564 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 HEPACAM2A8MVW5 462 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
RTN3-207ENST00000536011 DPYSL4O14531 572 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 LRRN2O75325 713 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 GJA1P17302 382 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 CDC25CP30307 473 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 VIPR2P41587 438 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 MLLT6P55198 1093 aaPredicted RBP14.15□□□□□ -0.14
RTN3-207ENST00000536011 AMPD3Q01432 767 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 MGAT5BQ3V5L5 792 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 CRELD2Q6UXH1 353 aaPredicted RBP14.15□□□□□ -0.14
RTN3-207ENST00000536011 DNAJB7Q7Z6W7 309 aaPredicted RBP14.15□□□□□ -0.14
RTN3-207ENST00000536011 EFCAB13Q8IY85 973 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 LRRC52Q8N7C0 313 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 LRRC3Q9BY71 257 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 DNAJC25Q9H1X3 360 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 CRISPLD1Q9H336 500 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 ATXN3LQ9H3M9 355 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 ITGA11Q9UKX5 1188 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 MTF2Q9Y483 593 aaPredicted RBP14.15□□□□□ -0.14
RTN3-207ENST00000536011 PIAS3Q9Y6X2 628 aa14.15□□□□□ -0.14
RTN3-207ENST00000536011 PATJQ8NI35 1801 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 SPTLC2O15270 562 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 CHADO15335 359 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 EXTL3O43909 919 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 HUS1O60921 280 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 PPP6R2O75170 966 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 GABRR2P28476 465 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 FCHO2Q0JRZ9 810 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 NFE2Q16621 373 aaPredicted RBP14.14□□□□□ -0.15
RTN3-207ENST00000536011 WSCD1Q658N2 575 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 TMEM86AQ8N2M4 240 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 PDILTQ8N807 584 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 LINC00301Q8NCQ3 95 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 SPATA18Q8TC71 538 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 ATRIPQ8WXE1 791 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 FAM3CQ92520 227 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 TMEM209Q96SK2 561 aa14.14□□□□□ -0.15
RTN3-207ENST00000536011 HINFPQ9BQA5 517 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms