RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PADI4Q9UM07 663 aa6.09□□□□□ -1.43
VBP1-203ENST00000535916 SPATA31A3Q5VYP0 1347 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 LINC01548A6NM66 108 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 ZNF785A8K8V0 405 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 MALP21145 153 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 DRD4P21917 467 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 SNAPC2Q13487 334 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 TMEM119Q4V9L6 283 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 KHDC1Q4VXA5 237 aaKnown RBP6.08□□□□□ -1.44
VBP1-203ENST00000535916 ZNF782Q6ZMW2 699 aaPredicted RBP6.08□□□□□ -1.44
VBP1-203ENST00000535916 PDSS2Q86YH6 399 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 VGLL2Q8N8G2 317 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 FKBP10Q96AY3 582 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 TPSD1Q9BZJ3 242 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 FLRT1Q9NZU1 646 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 SERGEFQ9UGK8 458 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 TRHDEQ9UKU6 1024 aa6.08□□□□□ -1.44
VBP1-203ENST00000535916 NT5C1B-RDH14C9J2C7 533 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 FZD9O00144 591 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 GJB1P08034 283 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 EBLN1P0CF75 366 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 CCT8P50990 548 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 SLC10A2Q12908 348 aaPredicted RBP6.07□□□□□ -1.44
VBP1-203ENST00000535916 LLGL1Q15334 1064 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 PCBP2Q15366 365 aaKnown RBP eCLIP6.07□□□□□ -1.44
VBP1-203ENST00000535916 SYDE2Q5VT97 1194 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 TAF2Q6P1X5 1199 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 SLC4A10Q6U841 1118 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 SEMA6DQ8NFY4 1073 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 OSBPL9Q96SU4 736 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 ALG8Q9BVK2 526 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 ACTRT3Q9BYD9 372 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 AMBRA1Q9C0C7 1298 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 BRD9Q9H8M2 597 aa6.07□□□□□ -1.44
VBP1-203ENST00000535916 CFAP20Q9Y6A4 193 aaKnown RBP6.07□□□□□ -1.44
VBP1-203ENST00000535916 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 TRIAP1O43715 76 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 HNRNPCP07910 306 aaKnown RBP eCLIP6.06□□□□□ -1.44
VBP1-203ENST00000535916 ZFXP17010 805 aaPredicted RBP6.06□□□□□ -1.44
VBP1-203ENST00000535916 CHRM3P20309 590 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 PCSK6P29122 969 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 ZNF135P52742 658 aaPredicted RBP6.06□□□□□ -1.44
VBP1-203ENST00000535916 DSC2Q02487 901 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 GRM1Q13255 1194 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 UAP1L1Q3KQV9 507 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 SUMO4Q6EEV6 95 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 BHLHA9Q7RTU4 235 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 PSD4Q8NDX1 1056 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 MAN1C1Q9NR34 630 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 SIDT1Q9NXL6 827 aaKnown RBP6.06□□□□□ -1.44
VBP1-203ENST00000535916 EHD3Q9NZN3 535 aa6.06□□□□□ -1.44
VBP1-203ENST00000535916 LRRC14BA6NHZ5 514 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 RPLP2P05387 115 aaKnown RBP6.05□□□□□ -1.44
VBP1-203ENST00000535916 GNAI3P08754 354 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 CYP2C19P33261 490 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 GNAI1P63096 354 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 HABP2Q14520 560 aaPredicted RBP6.05□□□□□ -1.44
VBP1-203ENST00000535916 MTX3Q5HYI7 312 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 RBM20Q5T481 1227 aaKnown RBP6.05□□□□□ -1.44
VBP1-203ENST00000535916 EGFLAMQ63HQ2 1017 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 TTC7BQ86TV6 843 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 ZNF366Q8N895 744 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 Q8N9P0 234 aaPredicted RBP6.05□□□□□ -1.44
VBP1-203ENST00000535916 CCDC8Q9H0W5 538 aaPredicted RBP6.05□□□□□ -1.44
VBP1-203ENST00000535916 SLAMF7Q9NQ25 335 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 RLIMQ9NVW2 624 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 CFAP97Q9P2B7 532 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 AGAP1Q9UPQ3 857 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 ATP8A1Q9Y2Q0 1164 aa6.05□□□□□ -1.44
VBP1-203ENST00000535916 ZNF804BA4D1E1 1349 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 VPS4BO75351 444 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 PRR35P0CG20 571 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 PHKA1P46020 1223 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 SSBP2P81877 361 aaPredicted RBP6.04□□□□□ -1.44
VBP1-203ENST00000535916 EIF2B5Q13144 721 aaKnown RBP6.04□□□□□ -1.44
VBP1-203ENST00000535916 MTMR1Q13613 665 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 TBCCQ15814 346 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 C9orf106Q8NAJ2 232 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 CNPPD1Q9BV87 410 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 C1orf43Q9BWL3 253 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 TMX1Q9H3N1 280 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 GPR35Q9HC97 309 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 SERTAD4Q9NUC0 356 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.04□□□□□ -1.44
VBP1-203ENST00000535916 MRFAP1Q9Y605 127 aa6.04□□□□□ -1.44
VBP1-203ENST00000535916 SHTN1A0MZ66 631 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 TARM1B6A8C7 271 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 CHEK2O96017 543 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 JUPP14923 745 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 ITGALP20701 1170 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 SMARCA1P28370 1054 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 TOB1P50616 345 aaPredicted RBP6.03□□□□□ -1.44
VBP1-203ENST00000535916 KRT85P78386 507 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 PLAC9Q5JTB6 97 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 VPS53Q5VIR6 699 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 ZNF626Q68DY1 528 aa6.03□□□□□ -1.44
VBP1-203ENST00000535916 ZNF551Q7Z340 670 aaPredicted RBP6.03□□□□□ -1.44
VBP1-203ENST00000535916 KLHDC4Q8TBB5 520 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms