RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FITM2Q8N6M3 262 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 ACRBPQ8NEB7 543 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 KLHDC4Q8TBB5 520 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 MDM1Q8TC05 714 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 IPCEF1Q8WWN9 437 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 TFAP2CQ92754 450 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 DPF2Q92785 391 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 RUNDC1Q96C34 613 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 TNIP3Q96KP6 325 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 TAAR9Q96RI9 348 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 GPHA2Q96T91 129 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 DPYSL5Q9BPU6 564 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 PLA2G12BQ9BX93 195 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 ENKD1Q9H0I2 346 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 ZNF700Q9H0M5 742 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 SLC12A5Q9H2X9 1139 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 PRDM12Q9H4Q4 367 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 ZSCAN32Q9NX65 697 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 RTEL1Q9NZ71 1219 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 AJAP1Q9UKB5 411 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 LIMCH1Q9UPQ0 1083 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 COL5A2P05997 1499 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-202ENST00000535689 PIK3C2GO75747 1445 aa4.03□□□□□ -1.76
SNHG1-202ENST00000535689 BTAF1O14981 1849 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 RGPD5Q99666 1765 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 USP19O94966 1318 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 ANO9A1A5B4 782 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 ISM1B1AKI9 464 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 MYO1CO00159 1063 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 FRS3O43559 492 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 UBXN7O94888 489 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 TRIM27P14373 513 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 ALOX15P16050 662 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-202ENST00000535689 MALP21145 153 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 HTR1BP28222 390 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 GNALP38405 381 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 PLP2Q04941 152 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 BTKQ06187 659 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 PIGFQ07326 219 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 NOGQ13253 232 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 CRHR2Q13324 411 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 IFIT5Q13325 482 aaKnown RBP4.02□□□□□ -1.77
SNHG1-202ENST00000535689 POLD3Q15054 466 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-202ENST00000535689 LRRC41Q15345 812 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 TBR1Q16650 682 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 BMT2Q1RMZ1 405 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 TBC1D10BQ4KMP7 808 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-202ENST00000535689 KHDC1Q4VXA5 237 aaKnown RBP4.02□□□□□ -1.77
SNHG1-202ENST00000535689 PRAMEF14Q5SWL7 426 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 Q6ZVL8 140 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 MAEAQ7L5Y9 396 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 HEATR3Q7Z4Q2 680 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 IL17RDQ8NFM7 739 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 MDGA1Q8NFP4 955 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 CXorf38Q8TB03 319 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 FEZF2Q8TBJ5 459 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 CFHR4Q92496 578 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 HOXB13Q92826 284 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-202ENST00000535689 EDAQ92838 391 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 MRGPRX4Q96LA9 322 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 MED15Q96RN5 788 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 CGRRF1Q99675 332 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 MRI1Q9BV20 369 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 SARGQ9BW04 601 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 BRD9Q9H8M2 597 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 DMRT3Q9NQL9 472 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 TPCN1Q9ULQ1 816 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 PTPN22Q9Y2R2 807 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 LMO7Q8WWI1 1683 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 NSD3Q9BZ95 1437 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 ADCY9O60503 1353 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 PLEKHG2Q9H7P9 1386 aa4.02□□□□□ -1.77
SNHG1-202ENST00000535689 PNPLA7Q6ZV29 1317 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 NHSQ6T4R5 1651 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 WNK3Q9BYP7 1800 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 OTOL1A6NHN0 477 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 CAPN14A8MX76 684 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 K7ESM1 405 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 B3GALT2O43825 422 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ZNF623O75123 536 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 HAUS5O94927 633 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 ITGB3P05106 788 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 HSPA1AP0DMV8 641 aaKnown RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 HSPA1BP0DMV9 641 aaKnown RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 TYRP14679 529 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 VEGFAP15692 232 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 HIBADHP31937 336 aaKnown RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 MSX2P35548 267 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 KCNJ5P48544 419 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 PIK3CGP48736 1102 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 MAN2A2P49641 1150 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 AGFG1P52594 562 aaKnown RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 TLE1Q04724 770 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 MTM1Q13496 603 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 IL10RAQ13651 578 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 UBXN2BQ14CS0 331 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 SEPT2Q15019 361 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 PRKD1Q15139 912 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-202ENST00000535689 C3orf36Q3SXR2 165 aa4.01□□□□□ -1.77
SNHG1-202ENST00000535689 SPDYE7PQ495Y7 208 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms