RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TMEM86AQ8N2M4 240 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 SLC7A14Q8TBB6 771 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 RIPOR3Q96MK2 946 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 CEP63Q96MT8 703 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 UHRF1Q96T88 793 aaPredicted RBP24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 VRTNQ9H8Y1 702 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 BICDL2A1A5D9 508 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 SEC24AO95486 1093 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 VNN2O95498 520 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 CPB1P15086 417 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 HOXA9P31269 272 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 ZP2Q05996 745 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 UVSSAQ2YD98 709 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 ATAT1Q5SQI0 421 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 CYP26C1Q6V0L0 522 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 RTL10Q7L3V2 364 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 DPH6Q7L8W6 267 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 OSTM1Q86WC4 334 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 ADHFE1Q8IWW8 467 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 THEM5Q8N1Q8 247 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 SPATA18Q8TC71 538 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 SYAP1Q96A49 352 aaPredicted RBP24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 NECTIN4Q96NY8 510 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 COL25A1Q9BXS0 654 aaPredicted RBP24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 PRKD2Q9BZL6 878 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 ZCWPW1Q9H0M4 648 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 POMKQ9H5K3 350 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 PRKAG3Q9UGI9 489 aa24.4■■□□□ 1.5
SFSWAP-204ENST00000535399 GABRDO14764 452 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 HNRNPA1P09651 372 aaKnown RBP eCLIP24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 GCLMP48507 274 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 ADCY1Q08828 1119 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 GPR17Q13304 367 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 PPM1LQ5SGD2 360 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 CCDC149Q6ZUS6 474 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 FILIP1Q7Z7B0 1213 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 TCEAL8Q8IYN2 117 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 ADGRF2Q8IZF7 708 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 MLKLQ8NB16 471 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 SMG7Q92540 1137 aaKnown RBP24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 PHF7Q9BWX1 381 aaPredicted RBP24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 MAFFQ9ULX9 164 aa24.39■■□□□ 1.49
SFSWAP-204ENST00000535399 MBD3O95983 291 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 ELF1P32519 619 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 GTF2H1P32780 548 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 WDR72Q3MJ13 1102 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 RBM43Q6ZSC3 357 aaKnown RBP24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 LRRTM3Q86VH5 581 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 KBTBD7Q8WVZ9 684 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 PGLYRP2Q96PD5 576 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 MED15Q96RN5 788 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 CYP4F11Q9HBI6 524 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 TMEM8AQ9HCN3 771 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 TCF20Q9UGU0 1960 aaKnown RBP24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 TSC2P49815 1807 aa24.38■■□□□ 1.49
SFSWAP-204ENST00000535399 HLA-DRAP01903 254 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 POU2F2P09086 479 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 ZNF699Q32M78 642 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 ELMO3Q96BJ8 720 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 MMS19Q96T76 1030 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 CRISPLD1Q9H336 500 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 DDX43Q9NXZ2 648 aaKnown RBP24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 ARMCX3Q9UH62 379 aaPredicted RBP24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 RWDD2AQ9UIY3 292 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 POLIQ9UNA4 740 aa24.37■■□□□ 1.49
SFSWAP-204ENST00000535399 MTMR11A4FU01 709 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 C19orf67A6NJJ6 358 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 PRRG1O14668 218 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 CCL16O15467 120 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 HCRTO43612 131 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 WARSP23381 471 aaKnown RBP24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 LHX1P48742 406 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 NLRP12P59046 1061 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 TNNC1P63316 161 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 SGSM1Q2NKQ1 1148 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 DPCR1Q3MIW9 517 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 FRMD5Q7Z6J6 570 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 ATAD1Q8NBU5 361 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 TAS1R2Q8TE23 839 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 ACBD6Q9BR61 282 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 MMRN2Q9H8L6 949 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 METTL14Q9HCE5 456 aaKnown RBP24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 CD320Q9NPF0 282 aa24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 NXF1Q9UBU9 619 aaKnown RBP24.36■■□□□ 1.49
SFSWAP-204ENST00000535399 C5orf42Q9H799 3197 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 TACC1O75410 805 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 ASS1P00966 412 aaKnown RBP24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 FAM163BP0C2L3 166 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 ACAT1P24752 427 aaKnown RBP24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 PIK3CAP42336 1068 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 MYL7Q01449 175 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 SLC39A12Q504Y0 691 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 DCAF17Q5H9S7 520 aaPredicted RBP24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 TAF4BQ92750 862 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 PKMYT1Q99640 499 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 MRPL45Q9BRJ2 306 aaKnown RBP24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 PIDD1Q9HB75 910 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 WDR6Q9NNW5 1121 aaKnown RBP24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 INSL5Q9Y5Q6 135 aa24.35■■□□□ 1.49
SFSWAP-204ENST00000535399 NCOR1O75376 2440 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms