RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ZNF507Q8TCN5 953 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 SPPL2BQ8TCT7 592 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 DEPDC1BQ8WUY9 529 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 IRF7Q92985 503 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 PSMG2Q969U7 264 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 SAAL1Q96ER3 474 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 CBWD1Q9BRT8 395 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 TRMT61BQ9BVS5 477 aaKnown RBP14.45□□□□□ -0.1
CAPN1-228ENST00000534373 PLA2G2FQ9BZM2 168 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 DNAJC25Q9H1X3 360 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 CRISPLD1Q9H336 500 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 SEMA4AQ9H3S1 761 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 SLC27A5Q9Y2P5 690 aa14.45□□□□□ -0.1
CAPN1-228ENST00000534373 ANK1P16157 1881 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 ZNF233A6NK53 670 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 NCAM2O15394 837 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 GFRA3O60609 400 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 DCNP07585 359 aaKnown RBP14.44□□□□□ -0.1
CAPN1-228ENST00000534373 RBP5P82980 135 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 WSCD1Q658N2 575 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 TMC8Q8IU68 726 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 TMEM86AQ8N2M4 240 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 C1orf127Q8N9H9 656 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 SHKBP1Q8TBC3 707 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 DHX58Q96C10 678 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 ZSWIM3Q96MP5 696 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 TMEM209Q96SK2 561 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 FGFBP2Q9BYJ0 223 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 GDAP2Q9NXN4 497 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 FAM13BQ9NYF5 915 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 ZMYM5Q9UJ78 669 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 AGAP1Q9UPQ3 857 aa14.44□□□□□ -0.1
CAPN1-228ENST00000534373 MRPS17Q9Y2R5 130 aaKnown RBP14.44□□□□□ -0.1
CAPN1-228ENST00000534373 SCN1AP35498 2009 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 PVALEFA0A1B0GWK0 134 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 FAM170BA6NMN3 283 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 MAN2B1O00754 1011 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 POLR2DO15514 142 aaKnown RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 HUS1O60921 280 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 ITGB3P05106 788 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 GLULP15104 373 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 WEE1P30291 646 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 POLR2BP30876 1174 aaKnown RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 MLLT6P55198 1093 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 ASIC1P78348 528 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 VEPH1Q14D04 833 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 TEAD2Q15562 447 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 NFE2Q16621 373 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 SLC39A12Q504Y0 691 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 ZNF852Q6ZMS4 543 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 UNC13DQ70J99 1090 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 EPM2AIP1Q7L775 607 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 DPH6Q7L8W6 267 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 C1orf210Q8IVY1 113 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 MFSD6LQ8IWD5 586 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 CSGALNACT2Q8N6G5 542 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 ZSWIM2Q8NEG5 633 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 CXorf38Q8TB03 319 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 ZSCAN18Q8TBC5 510 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 NKD2Q969F2 451 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 ACBD6Q9BR61 282 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 BCO2Q9BYV7 579 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 FOXQ1Q9C009 403 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 PCIF1Q9H4Z3 704 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 BRD9Q9H8M2 597 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 LTB4R2Q9NPC1 389 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 RCOR1Q9UKL0 485 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 PCDHA7Q9UN72 937 aa14.43□□□□□ -0.1
CAPN1-228ENST00000534373 R3HCC1Q9Y3T6 440 aaKnown RBP14.43□□□□□ -0.1
CAPN1-228ENST00000534373 DMDP11532 3685 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 A0A1W2PRU2 124 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 GOLGA8IPA6NC78 632 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 GOLGA8JA6NMD2 632 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 TMEM191BP0C7N4 346 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 ME1P48163 572 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 WNT7BP56706 349 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 TSPY1Q01534 308 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 EHHADHQ08426 723 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 DUOXA2Q1HG44 320 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 MGAT5BQ3V5L5 792 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 FAM26FQ5R3K3 315 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 FOXD4L5Q5VV16 416 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-228ENST00000534373 RESP18Q5W5W9 173 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 VITQ6UXI7 678 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 LRRTM3Q86VH5 581 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 FOXD4L4Q8WXT5 416 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-228ENST00000534373 CLDN23Q96B33 292 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 ANKRD36BP1Q96IX9 119 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 SLITRK6Q9H5Y7 841 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 PDE11AQ9HCR9 933 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 ZNF334Q9HCZ1 680 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-228ENST00000534373 INTS13Q9NVM9 706 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 OBP2AQ9NY56 170 aa14.42□□□□□ -0.1
CAPN1-228ENST00000534373 CGNQ9P2M7 1197 aaKnown RBP14.42□□□□□ -0.1
CAPN1-228ENST00000534373 UBE4BO95155 1302 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 PRR23AA6NEV1 266 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 SOBPA7XYQ1 873 aa14.41□□□□□ -0.1
CAPN1-228ENST00000534373 NRG2O14511 850 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-228ENST00000534373 ZNF263O14978 683 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms