RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	GRM6	O15303	877 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	PROM1	O43490	865 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	SLC43A1	O75387	559 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	RBMXL2	O75526	392 aa	Known RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	OFD1	O75665	1012 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	AHSG	P02765	367 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	FTL	P02792	175 aa	Predicted RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	ATF3	P18847	181 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	VCAM1	P19320	739 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	CYP2C19	P33261	490 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	SOX10	P56693	466 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	POU6F2	P78424	691 aa	Predicted RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	HSD11B2	P80365	405 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	ZNF844	Q08AG5	666 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	GALE	Q14376	348 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	GRM3	Q14832	879 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	ZNF169	Q14929	603 aa	Predicted RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	PGS1	Q32NB8	556 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	GADL1	Q6ZQY3	521 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	CLNK	Q7Z7G1	428 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	MYO1H	Q8N1T3	1032 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	PRR18	Q8N4B5	295 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	CAMKK1	Q8N5S9	505 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	PCSK9	Q8NBP7	692 aa	Known RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	NSUN6	Q8TEA1	469 aa	Known RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	DIS3L	Q8TF46	1054 aa	Known RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	FBXO41	Q8TF61	875 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	RGMA	Q96B86	450 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	TAAR9	Q96RI9	348 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	MAP3K14	Q99558	947 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	CGRRF1	Q99675	332 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	DUSP26	Q9BV47	211 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	PACSIN1	Q9BY11	444 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	UNKL	Q9H9P5	680 aa	Known RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	CASS4	Q9NQ75	786 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	VSX1	Q9NZR4	365 aa	Predicted RBP	4.37	□□□□□ -1.71
RDX-215	ENST00000533961	LRIT1	Q9P2V4	623 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	ABCF2	Q9UG63	623 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	MAP3K2	Q9Y2U5	619 aa		4.37	□□□□□ -1.71
RDX-215	ENST00000533961	TRGV11	A0A075B6L2	103 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	PRAMEF33	A0A0G2JMD5	474 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	MPPED1	O15442	326 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	PRAMEF10	O60809	474 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	DTNB	O60941	627 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	PROP1	O75360	226 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	SOAT2	O75908	522 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	CHEK2	O96017	543 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	KCNA2	P16389	499 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	MAL	P21145	153 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	PLA2G5	P39877	138 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	RARRES1	P49788	294 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	RPS7	P62081	194 aa	Known RBP	4.36	□□□□□ -1.71
RDX-215	ENST00000533961	TLE1	Q04724	770 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	NOG	Q13253	232 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	HLX	Q14774	488 aa	Predicted RBP	4.36	□□□□□ -1.71
RDX-215	ENST00000533961	ARHGAP29	Q52LW3	1261 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	CCDC157	Q569K6	752 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	ZNF365	Q70YC5	407 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	OVCH2	Q7RTZ1	564 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	HEATR3	Q7Z4Q2	680 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	PPP1R3B	Q86XI6	285 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	MAGEB6	Q8N7X4	407 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	NSUN7	Q8NE18	718 aa	Known RBP	4.36	□□□□□ -1.71
RDX-215	ENST00000533961	TTC8	Q8TAM2	541 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	SLC35G2	Q8TBE7	412 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	TBC1D15	Q8TC07	691 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	ZNF384	Q8TF68	577 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	PTCD3	Q96EY7	689 aa	Known RBP	4.36	□□□□□ -1.71
RDX-215	ENST00000533961		Q96MF0	132 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	TLR10	Q9BXR5	811 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	TCF7L1	Q9HCS4	588 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	INTS13	Q9NVM9	706 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	KCTD5	Q9NXV2	234 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	SLC17A6	Q9P2U8	582 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	USP25	Q9UHP3	1055 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	CPA4	Q9UI42	421 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	PCDHA1	Q9Y5I3	950 aa		4.36	□□□□□ -1.71
RDX-215	ENST00000533961	F2RL2	O00254	374 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	FOLR3	P41439	243 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	CACNA2D1	P54289	1103 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	PSMC1	P62191	440 aa	Known RBP	4.35	□□□□□ -1.71
RDX-215	ENST00000533961	NOMO3	P69849	1222 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	MRPS35	P82673	323 aa	Known RBP	4.35	□□□□□ -1.71
RDX-215	ENST00000533961	NOMO2	Q5JPE7	1267 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	ATAT1	Q5SQI0	421 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	KIAA0895L	Q68EN5	471 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	SWSAP1	Q6NVH7	229 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	NACC2	Q96BF6	587 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	MARS2	Q96GW9	593 aa	Known RBP	4.35	□□□□□ -1.71
RDX-215	ENST00000533961	PGBD1	Q96JS3	809 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	PDLIM2	Q96JY6	352 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	FAM167A	Q96KS9	214 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	AIFM2	Q9BRQ8	373 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	KIAA1586	Q9HCI6	787 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	NMRK2	Q9NPI5	230 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	KMT5A	Q9NQR1	393 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	GABBR1	Q9UBS5	961 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	PCDHA6	Q9UN73	950 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	SPATA31A3	Q5VYP0	1347 aa		4.35	□□□□□ -1.71
RDX-215	ENST00000533961	NT5C1B-RDH14	C9J2C7	533 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms