RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 PSMG2Q969U7 264 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 E2F7Q96AV8 911 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 BORCS6Q96GS4 357 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 ACCSQ96QU6 501 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
CPSF1-205ENST00000531042 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
CPSF1-205ENST00000531042 SLITRK6Q9H5Y7 841 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 OLFML3Q9NRN5 406 aa17.06■□□□□ 0.32
CPSF1-205ENST00000531042 A0A087X0B3 334 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 FRMD3A2A2Y4 597 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 HEPACAM2A8MVW5 462 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 MAN2B1O00754 1011 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 GCNT3O95395 438 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 IDEP14735 1019 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 STAT6P42226 847 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 CASP5P51878 434 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 SLC39A12Q504Y0 691 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 GAREM2Q75VX8 874 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 METTL23Q86XA0 190 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 ZNF687Q8N1G0 1237 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 FAM213AQ9BRX8 229 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 BACH2Q9BYV9 841 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 PCDHB13Q9Y5F0 798 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 GVINP1Q7Z2Y8 2422 aa17.05■□□□□ 0.32
CPSF1-205ENST00000531042 KPNA7A9QM74 516 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 ZNF263O14978 683 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 STX6O43752 255 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 FGF19O95750 216 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 TUFMP49411 452 aaKnown RBP17.04■□□□□ 0.32
CPSF1-205ENST00000531042 WNT7BP56706 349 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 ALCAMQ13740 583 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 SV2CQ496J9 727 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 STXBP5Q5T5C0 1151 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 WSCD1Q658N2 575 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 ITIH5Q86UX2 942 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 THEM5Q8N1Q8 247 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 ZSWIM2Q8NEG5 633 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 RSPRY1Q96DX4 576 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 MKNK1Q9BUB5 465 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 FGFBP2Q9BYJ0 223 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 PANK4Q9NVE7 773 aa17.04■□□□□ 0.32
CPSF1-205ENST00000531042 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 ARNTLO00327 626 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 LDHAP00338 332 aaKnown RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 GARTP22102 1010 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 GABRR2P28476 465 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 CDR1P51861 262 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 CSTF1Q05048 431 aaKnown RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 SMARCB1Q12824 385 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 MGAT5BQ3V5L5 792 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 LRRTM3Q86VH5 581 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 ARID3BQ8IVW6 561 aaPredicted RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 BRSK2Q8IWQ3 736 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 SYCP3Q8IZU3 236 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 C2orf15Q8WU43 125 aaKnown RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 ZNF560Q96MR9 790 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 SEPT5Q99719 369 aaPredicted RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 ATXN3LQ9H3M9 355 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 NDRG2Q9UN36 371 aaKnown RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 PIAS3Q9Y6X2 628 aa17.03■□□□□ 0.32
CPSF1-205ENST00000531042 NUP210Q8TEM1 1887 aaPredicted RBP17.03■□□□□ 0.32
CPSF1-205ENST00000531042 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
CPSF1-205ENST00000531042 ATF6P18850 670 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 PNPLA4P41247 253 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 MLLT6P55198 1093 aaPredicted RBP17.02■□□□□ 0.32
CPSF1-205ENST00000531042 TFAMQ00059 246 aaKnown RBP17.02■□□□□ 0.32
CPSF1-205ENST00000531042 FCHO2Q0JRZ9 810 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 VEPH1Q14D04 833 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 GPR158Q5T848 1215 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 YAF2Q8IY57 180 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 PDILTQ8N807 584 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 LINC00301Q8NCQ3 95 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 FAM3CQ92520 227 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 RBAKQ9NYW8 714 aaPredicted RBP17.02■□□□□ 0.32
CPSF1-205ENST00000531042 DMXL1Q9Y485 3027 aa17.02■□□□□ 0.32
CPSF1-205ENST00000531042 GOLGA8IPA6NC78 632 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 GOLGA8JA6NMD2 632 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 TULP1O00294 542 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 CHADO15335 359 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 EXTL3O43909 919 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 PRPF6O94906 941 aaKnown RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 ITGB3P05106 788 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 POLR2BP30876 1174 aaKnown RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 MTAPQ13126 283 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 STK38Q15208 465 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 ARHGAP15Q53QZ3 475 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 GPIHBP1Q8IV16 184 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 CCDC65Q8IXS2 484 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
CPSF1-205ENST00000531042 C1orf127Q8N9H9 656 aa17.01■□□□□ 0.31
CPSF1-205ENST00000531042 SUMF1Q8NBK3 374 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms