RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 ARID5AQ03989 594 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 YWHAHQ04917 246 aaPredicted RBP16.4■□□□□ 0.22
LTBP3-216ENST00000530426 ORC1Q13415 861 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 ASIC2Q16515 512 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 SFMBT2Q5VUG0 894 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 PPP2R2DQ66LE6 453 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 OVOS1Q6IE37 1185 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 PDXDC1Q6P996 788 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.4■□□□□ 0.22
LTBP3-216ENST00000530426 TAS1R1Q7RTX1 841 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 RBBP8NLQ8NC74 664 aaPredicted RBP16.4■□□□□ 0.22
LTBP3-216ENST00000530426 BAP1Q92560 729 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 B3GALT6Q96L58 329 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 SAMD11Q96NU1 681 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 TGS1Q96RS0 853 aaKnown RBP16.4■□□□□ 0.22
LTBP3-216ENST00000530426 CERS4Q9HA82 394 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 SLC28A3Q9HAS3 691 aa16.4■□□□□ 0.22
LTBP3-216ENST00000530426 DDX43Q9NXZ2 648 aaKnown RBP16.4■□□□□ 0.22
LTBP3-216ENST00000530426 PUF60Q9UHX1 559 aaKnown RBP16.4■□□□□ 0.22
LTBP3-216ENST00000530426 MFAP3LO75121 409 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 CSPG5O95196 566 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 CYP11A1P05108 521 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 FAM163BP0C2L3 166 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 LINC00271P0C7V0 271 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 ACO1P21399 889 aaKnown RBP16.39■□□□□ 0.21
LTBP3-216ENST00000530426 LHX1P48742 406 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 JAM2P57087 298 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 TAP1Q03518 808 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 USP41Q3LFD5 358 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 DDX53Q86TM3 631 aaKnown RBP16.39■□□□□ 0.21
LTBP3-216ENST00000530426 OSTM1Q86WC4 334 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 KBTBD7Q8WVZ9 684 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 SHC3Q92529 594 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 TTPALQ9BTX7 342 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 HERC2P3Q9BVR0 1158 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 PLVAPQ9BX97 442 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 GPR88Q9GZN0 384 aa16.39■□□□□ 0.21
LTBP3-216ENST00000530426 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
LTBP3-216ENST00000530426 ZNHIT6Q9NWK9 470 aaKnown RBP16.39■□□□□ 0.21
LTBP3-216ENST00000530426 BARX2Q9UMQ3 279 aaPredicted RBP16.39■□□□□ 0.21
LTBP3-216ENST00000530426 H7C4K7 107 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 C2CD2LO14523 706 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 CYP26A1O43174 497 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 HCRTO43612 131 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 CILPO75339 1184 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 SOD2P04179 222 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 RB1P06400 928 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 CCDC172P0C7W6 258 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 FGFR3P22607 806 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 ACAT1P24752 427 aaKnown RBP16.38■□□□□ 0.21
LTBP3-216ENST00000530426 DNAJB2P25686 324 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 PLCB3Q01970 1234 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 CTXN3Q4LDR2 81 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 VARS2Q5ST30 1063 aaKnown RBP16.38■□□□□ 0.21
LTBP3-216ENST00000530426 CCDC186Q7Z3E2 898 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 SPRED2Q7Z698 418 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 UNC93AQ86WB7 457 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 FMNL3Q8IVF7 1028 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 VPS52Q8N1B4 723 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 UBR7Q8N806 425 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 FBXO22Q8NEZ5 403 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 RIN2Q8WYP3 895 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-216ENST00000530426 TMEM176AQ96HP8 235 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 HEXIM2Q96MH2 286 aaKnown RBP16.38■□□□□ 0.21
LTBP3-216ENST00000530426 NT5C1AQ9BXI3 368 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 PRO3102Q9H379 93 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 ALG13Q9NP73 1137 aaKnown RBP16.38■□□□□ 0.21
LTBP3-216ENST00000530426 HMGXB4Q9UGU5 601 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
LTBP3-216ENST00000530426 COLQQ9Y215 455 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-216ENST00000530426 URODP06132 367 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 CD19P15391 556 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 FERP16591 822 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 LMO2P25791 158 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 GLUD2P49448 558 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 GSDMDP57764 484 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 ERVK-21P61565 698 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 SMAD3P84022 425 aaKnown RBP16.37■□□□□ 0.21
LTBP3-216ENST00000530426 PTK2Q05397 1052 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 INCA1Q0VD86 236 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 BMS1Q14692 1282 aaKnown RBP16.37■□□□□ 0.21
LTBP3-216ENST00000530426 RTP2Q5QGT7 225 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 ZNF280DQ6N043 979 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 PRSS55Q6UWB4 352 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-216ENST00000530426 LIMS2Q7Z4I7 341 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 ACOT1Q86TX2 421 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 FAM71AQ8IYT1 594 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 SPATA18Q8TC71 538 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 ARNTL2Q8WYA1 636 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 TIFAQ96CG3 184 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 TWNKQ96RR1 684 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 C11orf84Q9BUA3 381 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-216ENST00000530426 VN1R3Q9BXE9 311 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 ELOVL4Q9GZR5 314 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 DPEP3Q9H4B8 488 aa16.37■□□□□ 0.21
LTBP3-216ENST00000530426 FAM124BQ9H5Z6 455 aaPredicted RBP16.37■□□□□ 0.21
LTBP3-216ENST00000530426 ABHD10Q9NUJ1 306 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms