RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 UBR7Q8N806 425 aa11.38□□□□□ -0.59
SOX6-213ENST00000530378 OR6B3Q8NGW1 331 aa11.38□□□□□ -0.59
SOX6-213ENST00000530378 RSPH1Q8WYR4 309 aa11.38□□□□□ -0.59
SOX6-213ENST00000530378 ELOVL4Q9GZR5 314 aa11.38□□□□□ -0.59
SOX6-213ENST00000530378 ADAM28Q9UKQ2 775 aa11.38□□□□□ -0.59
SOX6-213ENST00000530378 MYO7AQ13402 2215 aa11.38□□□□□ -0.59
SOX6-213ENST00000530378 TRIOBPQ9H2D6 2365 aa11.38□□□□□ -0.59
SOX6-213ENST00000530378 ALDH2P05091 517 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 CD19P15391 556 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 BRD2P25440 801 aaKnown RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 LMO2P25791 158 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 CLCN1P35523 988 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 ALDH7A1P49419 539 aaKnown RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 FAM171A1Q5VUB5 890 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 KCNT2Q6UVM3 1135 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 ENOSF1Q7L5Y1 443 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 FAM71AQ8IYT1 594 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 FIBCD1Q8N539 461 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 COLGALT1Q8NBJ5 622 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 ZNF558Q96NG5 402 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 BAG1Q99933 345 aaPredicted RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 GPR62Q9BZJ7 368 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 EDEM3Q9BZQ6 932 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 SEPT11Q9NVA2 429 aaKnown RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 ZNHIT6Q9NWK9 470 aaKnown RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 GDAP2Q9NXN4 497 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 A8MXQ7 604 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 CILPO75339 1184 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 ODC1P11926 461 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 PBX2P40425 430 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 AARSP49588 968 aaKnown RBP eCLIP11.37□□□□□ -0.59
SOX6-213ENST00000530378 HTRA4P83105 476 aaPredicted RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 CCZ1BP86790 482 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 CCZ1P86791 482 aaPredicted RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 KLHL30Q0D2K2 578 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 RASIP1Q5U651 963 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 HGSNATQ68CP4 663 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 FUT10Q6P4F1 479 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 FAM43BQ6ZT52 329 aaPredicted RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 TAS1R1Q7RTX1 841 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 IRF2BP2Q7Z5L9 587 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 ACOT1Q86TX2 421 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 NOP9Q86U38 636 aaKnown RBP11.37□□□□□ -0.59
SOX6-213ENST00000530378 DNAAF5Q86Y56 855 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 TMEM139Q8IV31 216 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 WHAMMQ8TF30 809 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 GDF15Q99988 308 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 TMEM175Q9BSA9 504 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 COLEC11Q9BWP8 271 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 VN1R3Q9BXE9 311 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 SNX25Q9H3E2 840 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 HAUS4Q9H6D7 363 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 FAM49BQ9NUQ9 324 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 ARHGAP20Q9P2F6 1191 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 INSL6Q9Y581 213 aa11.37□□□□□ -0.59
SOX6-213ENST00000530378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
SOX6-213ENST00000530378 C2CD2LO14523 706 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 THAP12O43422 761 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 ATP2C2O75185 946 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 CFHP08603 1231 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 FERP16591 822 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 GNA15P30679 374 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
SOX6-213ENST00000530378 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
SOX6-213ENST00000530378 RAD23BP54727 409 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 YWHAEP62258 255 aaKnown RBP11.36□□□□□ -0.59
SOX6-213ENST00000530378 PTK2Q05397 1052 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 ZNF571Q7Z3V5 609 aaPredicted RBP11.36□□□□□ -0.59
SOX6-213ENST00000530378 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 TOP6BLQ8N6T0 577 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 C12orf29Q8N999 325 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 SUSD3Q96L08 255 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 RAD9AQ99638 391 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 DESI2Q9BSY9 194 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.36□□□□□ -0.59
SOX6-213ENST00000530378 CYP3A43Q9HB55 503 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 SPTLC3Q9NUV7 552 aa11.36□□□□□ -0.59
SOX6-213ENST00000530378 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
SOX6-213ENST00000530378 BARX2Q9UMQ3 279 aaPredicted RBP11.36□□□□□ -0.59
SOX6-213ENST00000530378 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.593e-6■■■■■ 137.9
SOX6-213ENST00000530378 M0QZQ0 153 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 CA3P07451 260 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 OR4Q2P0C623 313 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 CCDC130P13994 396 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 CYP11B1P15538 503 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 LAG3P18627 525 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 DNAJB2P25686 324 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 CA8P35219 290 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 CTNNB1P35222 781 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 GNL1P36915 607 aaPredicted RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 PDE6CP51160 858 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 ZNF132P52740 706 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 INCA1Q0VD86 236 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 RTP2Q5QGT7 225 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 PRSS55Q6UWB4 352 aaPredicted RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 PALB2Q86YC2 1186 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 GLYCTKQ8IVS8 523 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 SLC4A11Q8NBS3 891 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms