RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 MMRN2Q9H8L6 949 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 SAMSN1Q9NSI8 373 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 INTS13Q9NVM9 706 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 KANSL3Q9P2N6 904 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 UBQLN1Q9UMX0 589 aaKnown RBP12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 C2CD2Q9Y426 696 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 NFE2L3Q9Y4A8 694 aa12.46□□□□□ -0.41
CCDC90B-210ENST00000528149 CACNA1IQ9P0X4 2223 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 DENND4AQ7Z401 1863 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 CLASP2O75122 1294 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 FGFR1OPO95684 399 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 CXCL14O95715 111 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 TMEM191BP0C7N4 346 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 TNNI1P19237 187 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 VAMP7P51809 220 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 SURF1Q15526 300 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 ZBTB6Q15916 424 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 C1orf220Q5T0J3 134 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 KIAA0319Q5VV43 1072 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 PDE12Q6L8Q7 609 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 CES5AQ6NT32 575 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 FUT10Q6P4F1 479 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 ZC3H14Q6PJT7 736 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 RSPO2Q6UXX9 243 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 INTS8Q75QN2 995 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 DDX53Q86TM3 631 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 IRF2BP1Q8IU81 584 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 CREBRFQ8IUR6 639 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 WDR49Q8IV35 697 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 BEST2Q8NFU1 509 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 TMC2Q8TDI7 906 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 ELMO3Q96BJ8 720 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 HERC2P3Q9BVR0 1158 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 THAP9Q9H5L6 903 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 CBX8Q9HC52 389 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 ARMCX3Q9UH62 379 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 FBXL21Q9UKT6 434 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 DERAQ9Y315 318 aa12.45□□□□□ -0.42
CCDC90B-210ENST00000528149 PODXLO00592 558 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 XPOTO43592 962 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 LILRB3O75022 631 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 TNNC2P02585 160 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 ADRB1P08588 477 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 CNPP09543 421 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 SPATA31D3P0C874 917 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 CTSAP10619 480 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 TKTP29401 623 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 PPM1AP35813 382 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 ZNF445P59923 1031 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 ITIH3Q06033 890 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 NCAPHQ15003 741 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 SPATA31D4Q6ZUB0 917 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 LUZP1Q86V48 1076 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 MRPL43Q8N983 215 aaKnown RBP12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 SUMF1Q8NBK3 374 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 CASP10Q92851 521 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 BPIFA3Q9BQP9 254 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 FANCLQ9NW38 375 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 DPP3Q9NY33 737 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 LZTS1Q9Y250 596 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 HCFC2Q9Y5Z7 792 aa12.44□□□□□ -0.42
CCDC90B-210ENST00000528149 DCDC2BA2VCK2 349 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 KCNJ18B7U540 433 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 SPTLC1O15269 473 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 GNA14O95837 355 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 ALDH2P05091 517 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 ITGB3P05106 788 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 KRT19P08727 400 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 HOXB3P14651 431 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 CYP3A5P20815 502 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 MTHFRP42898 656 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 MTIF2P46199 727 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 GCLMP48507 274 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 PPP3CAQ08209 521 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 BIRC3Q13489 604 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 KCNJ12Q14500 433 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 SMC1AQ14683 1233 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 IQCB1Q15051 598 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 UPP1Q16831 310 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 CDKAL1Q5VV42 579 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 C9orf57Q5W0N0 161 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 NT5DC4Q86YG4 428 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 FAM114A1Q8IWE2 563 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 TRIM59Q8IWR1 403 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 CACTINQ8WUQ7 758 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 SLC35C1Q96A29 364 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 KLHL5Q96PQ7 755 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 TSPAN18Q96SJ8 248 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 HSD3B7Q9H2F3 369 aa12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 METTL14Q9HCE5 456 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-210ENST00000528149 SIX4Q9UIU6 781 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms