RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 FGF13Q92913 245 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 PMEPA1Q969W9 287 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 TP53INP1Q96A56 240 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 MRFAP1L1Q96HT8 127 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 SCLT1Q96NL6 688 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 OSMRQ99650 979 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 SSBP4Q9BWG4 385 aaPredicted RBP4.51□□□□□ -1.69
CHD7-205ENST00000527825 AMNQ9BXJ7 453 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 KRTAP4-8Q9BYQ9 185 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 VAT1LQ9HCJ6 419 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 EPB41L4AQ9HCS5 686 aaPredicted RBP4.51□□□□□ -1.69
CHD7-205ENST00000527825 BRMS1Q9HCU9 246 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 JADE2Q9NQC1 790 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 DDX19AQ9NUU7 478 aaKnown RBP4.51□□□□□ -1.69
CHD7-205ENST00000527825 RNF19AQ9NV58 838 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 ZNF446Q9NWS9 450 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 PSD3Q9NYI0 1048 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 KANSL3Q9P2N6 904 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 SALL4Q9UJQ4 1053 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 FHOD1Q9Y613 1164 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 DMXL2Q8TDJ6 3036 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 PCNX2A6NKB5 2137 aa4.51□□□□□ -1.69
CHD7-205ENST00000527825 ASCC3Q8N3C0 2202 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 MUC22E2RYF6 1773 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 MYO18BQ8IUG5 2567 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 LNP1A1A4G5 178 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 SOWAHDA6NJG2 315 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 ENO4A6NNW6 628 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 K7ESF4 209 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 TEX28O15482 410 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 NDUFB5O43674 189 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 STX6O43752 255 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 PHACTR2O75167 634 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 HMMRO75330 724 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 ECI2O75521 394 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 SMNDC1O75940 238 aaKnown RBP eCLIP4.5□□□□□ -1.69
CHD7-205ENST00000527825 AKAP3O75969 853 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 PAPSS2O95340 614 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 SLU7O95391 586 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 ALDH2P05091 517 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 GALTP07902 379 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 CCNE1P24864 410 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 CHMLP26374 656 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 KLRC1P26715 233 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 GBP1P32455 592 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 NOP2P46087 812 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 SLC11A1P49279 550 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 GLUD2P49448 558 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 ATXN3P54252 364 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 HNRNPH2P55795 449 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 CCZ1BP86790 482 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 CCZ1P86791 482 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 ATP11AP98196 1134 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 CFHR1Q03591 330 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 LMAN2Q12907 356 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 TRAF1Q13077 416 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 DHX8Q14562 1220 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 KARSQ15046 597 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 KIZQ2M2Z5 673 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 QRICH1Q2TAL8 776 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 NOMO2Q5JPE7 1267 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 PPM1LQ5SGD2 360 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 CEP135Q66GS9 1140 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 GLB1LQ6UWU2 654 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 STOX1Q6ZVD7 989 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 FAM228AQ86W67 206 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 TMEM173Q86WV6 379 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 TICAM2Q86XR7 235 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 ADGRF4Q8IZF3 695 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 HDDC3Q8N4P3 179 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 LSM14AQ8ND56 463 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 CSGALNACT1Q8TDX6 532 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 SNX29Q8TEQ0 813 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 ING5Q8WYH8 240 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 KCNB2Q92953 911 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 ZNF707Q96C28 371 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 C16orf45Q96MC5 204 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 RPS6KC1Q96S38 1066 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 SENP7Q9BQF6 1050 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 TRMT61BQ9BVS5 477 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 TRAIPQ9BWF2 469 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 APOL6Q9BWW8 343 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 NUSAP1Q9BXS6 441 aaKnown RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 RASSF4Q9H2L5 321 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 CPVLQ9H3G5 476 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 NRDE2Q9H7Z3 1164 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 DACT1Q9NYF0 836 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 FOXD3Q9UJU5 478 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 SRPK3Q9UPE1 567 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 TRIM33Q9UPN9 1127 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 SLC8A2Q9UPR5 921 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 MTMR6Q9Y217 621 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 FAN1Q9Y2M0 1017 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 PIAS3Q9Y6X2 628 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 V9GYY5 206 aaPredicted RBP4.5□□□□□ -1.69
CHD7-205ENST00000527825 NOTCH4Q99466 2003 aa4.5□□□□□ -1.69
CHD7-205ENST00000527825 PI4KAP42356 2102 aa4.49□□□□□ -1.69
CHD7-205ENST00000527825 ZNF638Q14966 1978 aaKnown RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 TNRC6BQ9UPQ9 1833 aaKnown RBP4.49□□□□□ -1.69
CHD7-205ENST00000527825 LOC400499M0QZD8 3231 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms