RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SRPRBQ9Y5M8 271 aaKnown RBP24.2■■□□□ 1.46
TRAPPC4-208ENST00000527680 STYXL1Q9Y6J8 313 aa24.2■■□□□ 1.46
TRAPPC4-208ENST00000527680 FGF19O95750 216 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 GABRR2P28476 465 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 KPNA1P52294 538 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 VEPH1Q14D04 833 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 PTPAQ15257 358 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 ARHGAP15Q53QZ3 475 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 FAM173BQ6P4H8 233 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 ARID3BQ8IVW6 561 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 OR10T2Q8NGX3 314 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 PSMG2Q969U7 264 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 HVCN1Q96D96 273 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 PANK2Q9BZ23 570 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 IKZF4Q9H2S9 585 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 NCDNQ9UBB6 729 aa24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 FBXO2Q9UK22 296 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC4-208ENST00000527680 SCN1AP35498 2009 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 SHISA7A6NL88 538 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 CYP11A1P05108 521 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 IDEP14735 1019 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 CCNE1P24864 410 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 STXBP5Q5T5C0 1151 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 GPR158Q5T848 1215 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 SYCP3Q8IZU3 236 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 SUMF1Q8NBK3 374 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 ACCSQ96QU6 501 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 HSFX1Q9UBD0 423 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 SEL1LQ9UBV2 794 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 TICRRQ7Z2Z1 1910 aa24.18■■□□□ 1.46
TRAPPC4-208ENST00000527680 PATJQ8NI35 1801 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 MYMKA6NI61 221 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 IL18RAPO95256 599 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 GCNT3O95395 438 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 GAP43P17677 238 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 POU5F1Q01860 360 aaKnown RBP24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 PPP2R5DQ14738 602 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 WSCD1Q658N2 575 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 GAREM2Q75VX8 874 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 ERMP1Q7Z2K6 904 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 NOC3LQ8WTT2 800 aaKnown RBP24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 LPIN3Q9BQK8 851 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 FAM213AQ9BRX8 229 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 ZCWPW1Q9H0M4 648 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 PCDHB13Q9Y5F0 798 aa24.17■■□□□ 1.46
TRAPPC4-208ENST00000527680 TCHHQ07283 1943 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 KPNA7A9QM74 516 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 CHADO15335 359 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 SYT1P21579 422 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 ADSSP30520 456 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 TFAMQ00059 246 aaKnown RBP24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 SV2CQ496J9 727 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 CRELD2Q6UXH1 353 aaPredicted RBP24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 CCDC73Q6ZRK6 1079 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 GIPC2Q8TF65 315 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 SECISBP2LQ93073 1101 aaKnown RBP24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 RSPRY1Q96DX4 576 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 GCNAQ96QF7 691 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 CHRDQ9H2X0 955 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 WDR87Q6ZQQ6 2873 aa24.16■■□□□ 1.46
TRAPPC4-208ENST00000527680 STAT6P42226 847 aa24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 NRLP54845 237 aa24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 KCNA1Q09470 495 aa24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 NT5DC4Q86YG4 428 aa24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 EFCAB13Q8IY85 973 aa24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 DCP1BQ8IZD4 617 aaKnown RBP24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 ZBTB44Q8NCP5 570 aa24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 TTC8Q8TAM2 541 aa24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 CACTINQ8WUQ7 758 aaKnown RBP24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 FAM126AQ9BYI3 521 aaPredicted RBP24.15■■□□□ 1.46
TRAPPC4-208ENST00000527680 NCANO14594 1321 aa24.14■■□□□ 1.46
TRAPPC4-208ENST00000527680 SLC38A8A6NNN8 435 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 LDHAP00338 332 aaKnown RBP24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 SMARCB1Q12824 385 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 RESTQ13127 1097 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 L1TD1Q5T7N2 865 aaKnown RBP24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 LRRTM3Q86VH5 581 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 C2orf15Q8WU43 125 aaKnown RBP24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 DNAJC19Q96DA6 116 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 RMDN1Q96DB5 314 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 SAAL1Q96ER3 474 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 ZNF560Q96MR9 790 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 C8orf33Q9H7E9 229 aaPredicted RBP24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 PRMT8Q9NR22 394 aaPredicted RBP24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 FOXD4L1Q9NU39 408 aa24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 ABI2Q9NYB9 513 aaPredicted RBP24.14■■□□□ 1.45
TRAPPC4-208ENST00000527680 PPP1R37O75864 691 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 CDC25CP30307 473 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 PNPLA4P41247 253 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 MLLT6P55198 1093 aaPredicted RBP24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 CYP4F8P98187 520 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 FCHO2Q0JRZ9 810 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 ARHGAP29Q52LW3 1261 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 ZNF687Q8N1G0 1237 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 SPPL2BQ8TCT7 592 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 ZFYVE19Q96K21 471 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 IER2Q9BTL4 223 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 STRA6Q9BX79 667 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 TASP1Q9H6P5 420 aa24.13■■□□□ 1.45
TRAPPC4-208ENST00000527680 PANK4Q9NVE7 773 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms