RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 KRT19P08727 400 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 TUFMP49411 452 aaKnown RBP22.19■■□□□ 1.14
VPS28-206ENST00000526734 EPHA5P54756 1037 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 CYP24A1Q07973 514 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 BFSP1Q12934 665 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 PRSS36Q5K4E3 855 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 KRBA2Q6ZNG9 492 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 DPH6Q7L8W6 267 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 TOP6BLQ8N6T0 577 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 KIAA0895Q8NCT3 520 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 OR10T2Q8NGX3 314 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 SPPL2BQ8TCT7 592 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 PGLYRP2Q96PD5 576 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 CGRRF1Q99675 332 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 MFSD1Q9H3U5 465 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 RAPGEFL1Q9UHV5 662 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 SIX4Q9UIU6 781 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 FBXL21Q9UKT6 434 aa22.19■■□□□ 1.14
VPS28-206ENST00000526734 CLIC2O15247 247 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 EXOC3O60645 756 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 VNN2O95498 520 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 FGF19O95750 216 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 TSPY1Q01534 308 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 STK4Q13043 487 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 DUSP4Q13115 394 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 SLC9A9Q8IVB4 645 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 RSAD2Q8WXG1 361 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 SMOC2Q9H3U7 446 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 SLC2A4RGQ9NR83 387 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 CEP72Q9P209 647 aa22.18■■□□□ 1.14
VPS28-206ENST00000526734 GOLGA6L4A6NEF3 574 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 PDXKO00764 312 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 RHOBTB3O94955 611 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 MYL7Q01449 175 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 NFE2Q16621 373 aaPredicted RBP22.17■■□□□ 1.14
VPS28-206ENST00000526734 SLC5A9Q2M3M2 681 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 SLC39A12Q504Y0 691 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 ITIH5Q86UX2 942 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 PDCL2Q8N4E4 241 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 OR5B17Q8NGF7 314 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 RTP3Q9BQQ7 232 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 ACBD6Q9BR61 282 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 GPR88Q9GZN0 384 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 L1RE1Q9UN81 338 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 MYO10Q9HD67 2058 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 SCN1AP35498 2009 aa22.17■■□□□ 1.14
VPS28-206ENST00000526734 PTPRJQ12913 1337 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 ECI2O75521 394 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 ZNF202O95125 648 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 DLATP10515 647 aaKnown RBP22.16■■□□□ 1.14
VPS28-206ENST00000526734 TNNI1P19237 187 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 PCSK1P29120 753 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 PLA2G5P39877 138 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 LHX1P48742 406 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 AP3M2P53677 418 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 DPYDQ12882 1025 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 KCNB1Q14721 858 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 VEPH1Q14D04 833 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 PARM1Q6UWI2 310 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 TRAPPC11Q7Z392 1133 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 RDH13Q8NBN7 331 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 ATAD1Q8NBU5 361 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 ING5Q8WYH8 240 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 FGF14Q92915 247 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 FAM122AQ96E09 287 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 HPDLQ96IR7 371 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 TMEM209Q96SK2 561 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 GOLPH3LQ9H4A5 285 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 GDPD2Q9HCC8 539 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 SNX9Q9Y5X1 595 aa22.16■■□□□ 1.14
VPS28-206ENST00000526734 NARSO43776 548 aaKnown RBP22.15■■□□□ 1.14
VPS28-206ENST00000526734 CEBPBP17676 345 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 AVPR2P30518 371 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 CLCN5P51795 746 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 LMBRD2Q68DH5 695 aaPredicted RBP22.15■■□□□ 1.14
VPS28-206ENST00000526734 ADGRF2Q8IZF7 708 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 PSMG2Q969U7 264 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 CRISPLD1Q9H336 500 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 KCTD10Q9H3F6 313 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 DMAC2Q9NW81 257 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 PCDHB5Q9Y5E4 795 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 ZNF318Q5VUA4 2279 aa22.15■■□□□ 1.14
VPS28-206ENST00000526734 CALUO43852 315 aaPredicted RBP22.14■■□□□ 1.13
VPS28-206ENST00000526734 FAM163BP0C2L3 166 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 PFKPQ01813 784 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 ASTLQ6HA08 431 aaPredicted RBP22.14■■□□□ 1.13
VPS28-206ENST00000526734 CCDC127Q96BQ5 260 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 MCRS1Q96EZ8 462 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 DNAJC25Q9H1X3 360 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 ABCB6Q9NP58 842 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 DDX43Q9NXZ2 648 aaKnown RBP22.14■■□□□ 1.13
VPS28-206ENST00000526734 TRAF3IP3Q9Y228 551 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 SLC27A5Q9Y2P5 690 aa22.14■■□□□ 1.13
VPS28-206ENST00000526734 GABRDO14764 452 aa22.13■■□□□ 1.13
VPS28-206ENST00000526734 STAU1O95793 577 aaKnown RBP22.13■■□□□ 1.13
VPS28-206ENST00000526734 PDGFBP01127 241 aaPredicted RBP22.13■■□□□ 1.13
VPS28-206ENST00000526734 CFHP08603 1231 aa22.13■■□□□ 1.13
VPS28-206ENST00000526734 MYL4P12829 197 aa22.13■■□□□ 1.13
VPS28-206ENST00000526734 MGAT5BQ3V5L5 792 aa22.13■■□□□ 1.13
VPS28-206ENST00000526734 INTS6LQ5JSJ4 861 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms