RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	MGAT5	Q09328	741 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	LRP8	Q14114	963 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	DHX34	Q14147	1143 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TCEAL1	Q15170	157 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TXNRD1	Q16881	649 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TMEM63B	Q5T3F8	832 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ELMSAN1	Q6PJG2	1045 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZC3H18	Q86VM9	953 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	HEATR4	Q86WZ0	1026 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PCYOX1L	Q8NBM8	494 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	LPIN2	Q92539	896 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PRMT1	Q99873	361 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZBED2	Q9BTP6	218 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PHF20	Q9BVI0	1012 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TMEM106C	Q9BVX2	250 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TLR10	Q9BXR5	811 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	CAAP1	Q9H8G2	361 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZDHHC18	Q9NUE0	388 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANKMY1	Q9P2S6	941 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	XPO7	Q9UIA9	1087 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TRIM17	Q9Y577	477 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZNF804B	A4D1E1	1349 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	MYH1	P12882	1939 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	MYH2	Q9UKX2	1941 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TRIM64	A6NGJ6	449 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	CDK2AP1	O14519	115 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZNF185	O15231	689 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PRPF4	O43172	522 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TGDS	O95455	350 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	CDH3	P22223	829 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	AP2S1	P53680	142 aa	Predicted RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	DSTN	P60981	165 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	AP2B1	P63010	937 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ERVK-9	P63128	1117 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TAGLN	Q01995	201 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	SPA17	Q15506	151 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	NAB2	Q15742	525 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	MOG	Q16653	247 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	DGKD	Q16760	1214 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	RGS21	Q2M5E4	152 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TRMT10C	Q7L0Y3	403 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	DGLUCY	Q7Z3D6	616 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ECHDC2	Q86YB7	292 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	DCP2	Q8IU60	420 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	JADE3	Q92613	823 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PGBD4	Q96DM1	585 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	RMDN3	Q96TC7	470 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TBC1D10A	Q9BXI6	508 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	LIN7B	Q9HAP6	207 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PARVA	Q9NVD7	372 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	THG1L	Q9NWX6	298 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TRIM10	Q9UDY6	481 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	KCNN3	Q9UGI6	736 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	SEPT3	Q9UH03	358 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ATPIF1	Q9UII2	106 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	FBXL5	Q9UKA1	691 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	SCN7A	Q01118	1682 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PLEKHG3	A1L390	1219 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	KPNA4	O00629	521 aa	Predicted RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ARHGAP33	O14559	1287 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	RAD51C	O43502	376 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANPEP	P15144	967 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PTPRE	P23469	700 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	HPD	P32754	393 aa	Predicted RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	VPS41	P49754	854 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	GALK1	P51570	392 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	STRN3	Q13033	797 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ATP1A4	Q13733	1029 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	SELPLG	Q14242	412 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ADGRE1	Q14246	886 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	NFE2L1	Q14494	772 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	C4orf46	Q504U0	113 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	CYB5R4	Q7L1T6	521 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	MAEA	Q7L5Y9	396 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	CAND1	Q86VP6	1230 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	RTKN2	Q8IZC4	609 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	METTL13	Q8N6R0	699 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ARL6IP6	Q8N6S5	226 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	CCDC89	Q8N998	374 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	C10orf82	Q8WW14	230 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	NLRP4	Q96MN2	994 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM193B	Q96PV7	902 aa	Predicted RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TTC1	Q99614	292 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	PLVAP	Q9BX97	442 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANO3	Q9BYT9	981 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	FBXO2	Q9UK22	296 aa	Predicted RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	TMCC3	Q9ULS5	477 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	POLI	Q9UNA4	740 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANGEL1	Q9UNK9	670 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	SRPRB	Q9Y5M8	271 aa	Known RBP	4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	NUP188	Q5SRE5	1749 aa		4.05	□□□□□ -1.76
FAM49B-225	ENST00000523288	SYNGAP1	Q96PV0	1343 aa		4.04	□□□□□ -1.76
FAM49B-225	ENST00000523288	POTEC	B2RU33	542 aa		4.04	□□□□□ -1.76
FAM49B-225	ENST00000523288	KCNQ3	O43525	872 aa		4.04	□□□□□ -1.76
FAM49B-225	ENST00000523288	SH3BP5	O60239	455 aa		4.04	□□□□□ -1.76
FAM49B-225	ENST00000523288	TNFAIP8	O95379	198 aa		4.04	□□□□□ -1.76
FAM49B-225	ENST00000523288	GGPS1	O95749	300 aa		4.04	□□□□□ -1.76
FAM49B-225	ENST00000523288	OSBP	P22059	807 aa		4.04	□□□□□ -1.76
FAM49B-225	ENST00000523288	IDUA	P35475	653 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms