RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 PPP4R1Q8TF05 950 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 NCLNQ969V3 563 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 IFIH1Q9BYX4 1025 aaKnown RBP8.7□□□□□ -1.02
HMGB4-204ENST00000522796 ADAM7Q9H2U9 754 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 SH2D4AQ9H788 454 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 IL37Q9NZH6 218 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 SENP1Q9P0U3 644 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 ASIC3Q9UHC3 531 aa8.7□□□□□ -1.02
HMGB4-204ENST00000522796 CARMIL3Q8ND23 1372 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 GLI2P10070 1586 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 A2MP01023 1474 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 FAM237AA0A1B0GTK4 181 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 hCG_1642624A0A1W2PR95 340 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TYW5A2RUC4 315 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 IRS4O14654 1257 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TEX33O43247 280 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ZBTB43O43298 467 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 KRT36O76013 467 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ZBTB11O95625 1053 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 CLPTM1O96005 669 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TNFAIP3P21580 790 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 CMA1P23946 247 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 CTHP32929 405 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 KRT2P35908 639 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 VCPP55072 806 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 IFITM2Q01629 132 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 PPARAQ07869 468 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 CBLBQ13191 982 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 OASLQ15646 514 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF829Q3KNS6 432 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 NADK2Q4G0N4 442 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SWSAP1Q6NVH7 229 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SLC4A10Q6U841 1118 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 KSR2Q6VAB6 950 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 APTXQ7Z2E3 356 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 KCTD20Q7Z5Y7 419 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 STK32CQ86UX6 486 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 IPMKQ8NFU5 416 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SH3RF3Q8TEJ3 882 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 JPH3Q8WXH2 748 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 STMN2Q93045 179 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SLC7A6OSQ96CW6 309 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 PSD2Q9BQI7 771 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 MTFR1LQ9H019 292 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 DDX47Q9H0S4 455 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ISCUQ9H1K1 167 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF287Q9HBT7 754 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ZFYVE28Q9HCC9 887 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 MRPL40Q9NQ50 206 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 RBM12Q9NTZ6 932 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 MRPL39Q9NYK5 338 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 DNAJB4Q9UDY4 337 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TSPY2A6NKD2 308 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ECDO95905 644 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SNRPAP09012 282 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TSPY3P0CV98 308 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TSPY8P0CW00 308 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 CHN2P52757 468 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ALDH18A1P54886 795 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 GPR85P60893 370 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 VBP1P61758 197 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TSPY1Q01534 308 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 PTK2Q05397 1052 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ASPHQ12797 758 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ANO1Q5XXA6 986 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 POTEHQ6S545 545 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ADAMTSL2Q86TH1 951 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 VSIG1Q86XK7 387 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 NOSTRINQ8IVI9 506 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 LINC00301Q8NCQ3 95 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 HSPH1Q92598 858 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 E2F7Q96AV8 911 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ALKBH8Q96BT7 664 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 PGM2Q96G03 612 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SELENOSQ9BQE4 189 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 UBAC1Q9BSL1 405 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 EDEM3Q9BZQ6 932 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 PITHD1Q9GZP4 211 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SENP6Q9GZR1 1112 aaPredicted RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 VPS37BQ9H9H4 285 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF69Q9UC07 566 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 ADD3Q9UEY8 706 aaKnown RBP8.69□□□□□ -1.02
HMGB4-204ENST00000522796 TAGLN3Q9UI15 199 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 SALL4Q9UJQ4 1053 aa8.69□□□□□ -1.02
HMGB4-204ENST00000522796 WDR19Q8NEZ3 1342 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ESYT3A0FGR9 886 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 POLR1CO15160 346 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 ATMINO43313 823 aaPredicted RBP8.68□□□□□ -1.02
HMGB4-204ENST00000522796 SULT1C4O75897 302 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PFKFB1P16118 471 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 L1CAMP32004 1257 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 SOX11P35716 441 aa8.68□□□□□ -1.02
HMGB4-204ENST00000522796 PTPN9P43378 593 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms