RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 FGF18O76093 207 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 CD58P19256 250 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 FGFR3P22607 806 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 PBX2P40425 430 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 STAT1P42224 750 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 FXR1P51114 621 aaKnown RBP eCLIP27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 SMAD3P84022 425 aaKnown RBP27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 UNC93AQ86WB7 457 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 CNGA4Q8IV77 575 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 SPC24Q8NBT2 197 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 MRPL45Q9BRJ2 306 aaKnown RBP27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 SNX25Q9H3E2 840 aa27.42■■□□□ 1.98
NKX2-1-204ENST00000522719 AKR1B15C9JRZ8 316 aaPredicted RBP27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 FOXN3O00409 490 aaPredicted RBP27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 CILPO75339 1184 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 SOD2P04179 222 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 SOX5P35711 763 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 TAP1Q03518 808 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 USP41Q3LFD5 358 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 PDXDC1Q6P996 788 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 KLHL23Q8NBE8 558 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 PDLIM2Q96JY6 352 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 DNAI2Q9GZS0 605 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 PCDHB4Q9Y5E5 795 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 RNF225M0QZC1 329 aaPredicted RBP27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 TKTP29401 623 aaKnown RBP27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 KRT9P35527 623 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 GNL1P36915 607 aaPredicted RBP27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 ERVK-21P61565 698 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 OVOS1Q6IE37 1185 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 TMEM270Q6UE05 265 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 FAM71AQ8IYT1 594 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 OR6B3Q8NGW1 331 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 SYN2Q92777 582 aaPredicted RBP27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 C17orf80Q9BSJ5 609 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 TTPALQ9BTX7 342 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 VN1R3Q9BXE9 311 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 LZTS1Q9Y250 596 aa27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 TIMM13Q9Y5L4 95 aaPredicted RBP27.41■■□□□ 1.98
NKX2-1-204ENST00000522719 LRRC53A6NM62 1247 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 MFAP3LO75121 409 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 ARHGEF15O94989 841 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 OAZ2O95190 189 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 YWHAHQ04917 246 aaPredicted RBP27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 ARID5BQ14865 1188 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 C11orf84Q9BUA3 381 aaPredicted RBP27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 HERC2P3Q9BVR0 1158 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 NKX2-4Q9H2Z4 354 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 CHST7Q9NS84 486 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 PUF60Q9UHX1 559 aaKnown RBP27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 STXBP5LQ9Y2K9 1186 aa27.4■■□□□ 1.98
NKX2-1-204ENST00000522719 CCDC172P0C7W6 258 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 KRT5P13647 590 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 NDST1P52848 882 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 SFMBT2Q5VUG0 894 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 CEP57Q86XR8 500 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 GPR65Q8IYL9 337 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 THEM5Q8N1Q8 247 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 OR8K1Q8NGG5 319 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 WHAMMQ8TF30 809 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 DNAJC7Q99615 494 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 NT5C1AQ9BXI3 368 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 OXCT2Q9BYC2 517 aaPredicted RBP27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 SLC28A3Q9HAS3 691 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 AIPL1Q9NZN9 384 aa27.39■■□□□ 1.97
NKX2-1-204ENST00000522719 A8MXQ7 604 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 PCSK1P29120 753 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 USP8P40818 1118 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 ZNF132P52740 706 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 GSDMDP57764 484 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 BPIFB4P59827 614 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 UBE3AQ05086 875 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 MRPL58Q14197 206 aaKnown RBP27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 TSR1Q2NL82 804 aaKnown RBP27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 VARS2Q5ST30 1063 aaKnown RBP27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 PPP2R2DQ66LE6 453 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 ANKS3Q6ZW76 656 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 TAS1R1Q7RTX1 841 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 OSTM1Q86WC4 334 aa27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 RBBP8NLQ8NC74 664 aaPredicted RBP27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 DDX43Q9NXZ2 648 aaKnown RBP27.38■■□□□ 1.97
NKX2-1-204ENST00000522719 H7C4K7 107 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 PAEPP09466 180 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 FERP16591 822 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 DNAJB2P25686 324 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 HNRNPH3P31942 346 aaKnown RBP27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 ADKP55263 362 aaKnown RBP27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 LRIT3Q3SXY7 679 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 KIAA1841Q6NSI8 718 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 TC2NQ8N9U0 490 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 TNIP3Q96KP6 325 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 ACBD6Q9BR61 282 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 ABHD10Q9NUJ1 306 aa27.37■■□□□ 1.97
NKX2-1-204ENST00000522719 GFPT2O94808 682 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 GLUD2P49448 558 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 RAD23BP54727 409 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 DSG1Q02413 1049 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 CCDC173Q0VFZ6 552 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 RTP2Q5QGT7 225 aa27.36■■□□□ 1.97
NKX2-1-204ENST00000522719 ZNF280DQ6N043 979 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms