RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 CEP63Q96MT8 703 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 RPS6KC1Q96S38 1066 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 NRDE2Q9H7Z3 1164 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 ENAMQ9NRM1 1142 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 SLC38A7Q9NVC3 462 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 MSRAQ9UJ68 235 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 PLAGL2Q9UPG8 496 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 CTNND2Q9UQB3 1225 aa9.04□□□□□ -0.96
VPS13B-210ENST00000521932 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-210ENST00000521932 FNDC1Q4ZHG4 1894 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 C5orf67F2Z3F1 127 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 IKBKBO14920 756 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 FGFR1OPO95684 399 aaKnown RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 GNA14O95837 355 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 ALDH2P05091 517 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 CA3P07451 260 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 GALTP07902 379 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 BMP4P12644 408 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 STX17P56962 302 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 TAP1Q03518 808 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 CYP24A1Q07973 514 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 TUSC3Q13454 348 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 PAN2Q504Q3 1202 aaKnown RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 SPATA1Q5VX52 437 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 CEP135Q66GS9 1140 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 JADE1Q6IE81 842 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 FIGNL1Q6PIW4 674 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 C11orf57Q6ZUT1 292 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 INTS8Q75QN2 995 aaKnown RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 WDR49Q8IV35 697 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 CSGALNACT2Q8N6G5 542 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 EEF2KMTQ96G04 330 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 SCARF2Q96GP6 870 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 TMEM175Q9BSA9 504 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 PDE11AQ9HCR9 933 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 UBQLN1Q9UMX0 589 aaKnown RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 INPP5FQ9Y2H2 1132 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 RWDD3Q9Y3V2 267 aa9.03□□□□□ -0.96
VPS13B-210ENST00000521932 MRPL42Q9Y6G3 142 aaKnown RBP9.03□□□□□ -0.96
VPS13B-210ENST00000521932 CDH23Q9H251 3354 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM265A0A087WTH1 108 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 NRP1O14786 923 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 XPOTO43592 962 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 B4GALT3O60512 393 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 CAVIN2O95810 425 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 RB1P06400 928 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 EPB41P11171 864 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 LAG3P18627 525 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 CD33P20138 364 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 LRPAP1P30533 357 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 RPL9P32969 192 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 BMPR1AP36894 532 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 ALDH7A1P49419 539 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 AP3M2P53677 418 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 BCAR1P56945 870 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 ERVK-21P61565 698 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 SNRPNP63162 240 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 RNASELQ05823 741 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 SOX4Q06945 474 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 BFSP1Q12934 665 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM132DQ14C87 1099 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 UPP1Q16831 310 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 SWI5Q1ZZU3 235 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 ANO6Q4KMQ2 910 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 GLRA4Q5JXX5 417 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 KCNT2Q6UVM3 1135 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 FRMD5Q7Z6J6 570 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 USP37Q86T82 979 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 IRF2BP1Q8IU81 584 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 EFCAB13Q8IY85 973 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 FAM186BQ8IYM0 893 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 CXorf38Q8TB03 319 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 PLEKHO2Q8TD55 490 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 CACTINQ8WUQ7 758 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 TIFAQ96CG3 184 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 UROC1Q96N76 676 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 SAMD11Q96NU1 681 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 FAM193BQ96PV7 902 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 TGS1Q96RS0 853 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 FNBP1Q96RU3 617 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 NAT10Q9H0A0 1025 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 DNAJC25Q9H1X3 360 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 NKX2-4Q9H2Z4 354 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 SLC28A3Q9HAS3 691 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 METTL14Q9HCE5 456 aaKnown RBP9.02□□□□□ -0.97
VPS13B-210ENST00000521932 INTS13Q9NVM9 706 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 DNAJB4Q9UDY4 337 aa9.02□□□□□ -0.97
VPS13B-210ENST00000521932 ANO9A1A5B4 782 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 LRRIQ3A6PVS8 624 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 TMEM189-UBE2V1I3L0A0 370 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 PIRO00625 290 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 ZC3H11AO75152 810 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 EFEMP2O95967 443 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 NFICP08651 508 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 KRT13P13646 458 aa9.01□□□□□ -0.97
VPS13B-210ENST00000521932 HOXB4P17483 251 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-210ENST00000521932 TNNI1P19237 187 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms