RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 NCK2O43639 380 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 FAM107AO95990 144 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 MYBPC2Q14324 1141 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 GPAT2Q6NUI2 795 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 TAF2Q6P1X5 1199 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 ATP11CQ8NB49 1132 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 OR6P1Q8NGX9 317 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 TTC17Q96AE7 1141 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 SNF8Q96H20 258 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 GPRC5CQ9NQ84 441 aa16.96■□□□□ 0.31
USP42-207ENST00000521713 USP15Q9Y4E8 981 aaPredicted RBP16.96■□□□□ 0.31
USP42-207ENST00000521713 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
USP42-207ENST00000521713 ERVK-9P63128 1117 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 ERVK-24P63145 666 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 SYDE1Q6ZW31 735 aaPredicted RBP16.95■□□□□ 0.3
USP42-207ENST00000521713 ACAD11Q709F0 780 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 USP6NLQ92738 828 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 MKL1Q969V6 931 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 PPCSQ9HAB8 311 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 KRT82Q9NSB4 513 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 ZC3H11AO75152 810 aaKnown RBP eCLIP16.95■□□□□ 0.3
USP42-207ENST00000521713 HSPA4LO95757 839 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 ATP1A1P05023 1023 aaKnown RBP16.95■□□□□ 0.3
USP42-207ENST00000521713 ADORA2AP29274 412 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 PKN1Q16512 942 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 IL17RAQ96F46 866 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 PPP1R2P1Q96PQ5 205 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
USP42-207ENST00000521713 LSP1P33241 339 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 GIT2Q14161 759 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 STAT4Q14765 748 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 SLC35G2Q8TBE7 412 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 SGSM3Q96HU1 749 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 PPP1R3GB7ZBB8 358 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 ARHGAP15Q53QZ3 475 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 CDR2LQ86X02 465 aaPredicted RBP16.95■□□□□ 0.3
USP42-207ENST00000521713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.95■□□□□ 0.3
USP42-207ENST00000521713 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
USP42-207ENST00000521713 SMG5Q9UPR3 1016 aaKnown RBP16.95■□□□□ 0.3
USP42-207ENST00000521713 C3orf70A6NLC5 250 aaPredicted RBP16.94■□□□□ 0.3
USP42-207ENST00000521713 E5RI56 91 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 TMEM253P0C7T8 217 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 VGLL4Q14135 290 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 RHBDL3P58872 404 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 MED21Q13503 144 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 CUL2Q13617 745 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 DNAL1Q4LDG9 190 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 TMC2Q8TDI7 906 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 MCEEQ96PE7 176 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 WWP1Q9H0M0 922 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 AGPAT5Q9NUQ2 364 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 GOLGA8MH3BSY2 632 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 NVLO15381 856 aaKnown RBP16.94■□□□□ 0.3
USP42-207ENST00000521713 TBC1D12O60347 775 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 FKBP1BP68106 108 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 LAMB3Q13751 1172 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 CATSPERBQ9H7T0 1116 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 ABCF3Q9NUQ8 709 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 NAGPAQ9UK23 515 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 LRG1P02750 347 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 ELAVL2Q12926 359 aaKnown RBP16.94■□□□□ 0.3
USP42-207ENST00000521713 SLC12A1Q13621 1099 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 CYLC2Q14093 348 aaPredicted RBP16.94■□□□□ 0.3
USP42-207ENST00000521713 GOLGA7BQ2TAP0 167 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 IQSEC1Q6DN90 963 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 ALKBH8Q96BT7 664 aaKnown RBP16.94■□□□□ 0.3
USP42-207ENST00000521713 CHP1Q99653 195 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 TRIM54Q9BYV2 358 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 DSEQ9UL01 958 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 ARHGAP26Q9UNA1 814 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 FIS1Q9Y3D6 152 aa16.94■□□□□ 0.3
USP42-207ENST00000521713 PIK3R2O00459 728 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 ZBTB22O15209 634 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 TDRD10Q5VZ19 366 aaKnown RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 IZUMO3Q5VZ72 239 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 PPM1NQ8N819 430 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 SEC16BQ96JE7 1060 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 KLK14Q9P0G3 267 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 SCHIP1Q9P0W5 487 aaPredicted RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 WARS2Q9UGM6 360 aaKnown RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 MAPTP10636 758 aaKnown RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 SLC2A3P11169 496 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 INSRRP14616 1297 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 HARS2P49590 506 aaKnown RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 TOB1P50616 345 aaPredicted RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 IL1RL1Q01638 556 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 P3H1Q32P28 736 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 DAB2IPQ5VWQ8 1189 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 ATPAF2Q8N5M1 289 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 C1orf54Q8WWF1 131 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 EXT2Q93063 718 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 ING2Q9H160 280 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 PDP2Q9P2J9 529 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 RSPH10B2B2RC85 870 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 RSPH10BP0C881 870 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 PDIA2Q13087 525 aaKnown RBP16.93■□□□□ 0.3
USP42-207ENST00000521713 VPS11Q9H270 941 aa16.93■□□□□ 0.3
USP42-207ENST00000521713 SLC40A1Q9NP59 571 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms