RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTNNA1-228ENST00000521640 AMFRQ9UKV5 643 aa7.18□□□□□ -1.26
CTNNA1-228ENST00000521640 PCDHB2Q9Y5E7 798 aa7.18□□□□□ -1.26
CTNNA1-228ENST00000521640 IVNS1ABPQ9Y6Y0 642 aa7.18□□□□□ -1.26
CTNNA1-228ENST00000521640 CNTNAP2Q9UHC6 1331 aa7.18□□□□□ -1.26
CTNNA1-228ENST00000521640 ZNFX1Q9P2E3 1918 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 GOLGA8IPA6NC78 632 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 LRRIQ4A6NIV6 560 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 GOLGA8JA6NMD2 632 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 ZBTB42B2RXF5 422 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 OGTO15294 1046 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 FAM189A1O60320 539 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 BUB1BO60566 1050 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 MSCO60682 206 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 LRRN2O75325 713 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 SASH3O75995 380 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 ARIH2O95376 493 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 FTCDO95954 541 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 CYP1A2P05177 515 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 CYP11B1P15538 503 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 HOXB4P17483 251 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 PROZP22891 400 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 CTNNA2P26232 953 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 GSK3AP49840 483 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 SNRPNP63162 240 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 FMO1Q01740 532 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 C2orf54Q08AI8 447 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 FSTL1Q12841 308 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 PAK2Q13177 524 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 SMC1AQ14683 1233 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 PLCB4Q15147 1175 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 CRELD2Q6UXH1 353 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 TSHZ1Q6ZSZ6 1077 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 DAAM2Q86T65 1068 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 NOP9Q86U38 636 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 RPUSD2Q8IZ73 545 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 MREGQ8N565 214 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 PPTC7Q8NI37 304 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 FAM71BQ8TC56 605 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 TAS1R2Q8TE23 839 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 AENQ8WTP8 325 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 DDX1Q92499 740 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 SEMA4DQ92854 862 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 TMEM143Q96AN5 459 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 CCDC127Q96BQ5 260 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 RUNDC3BQ96NL0 473 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 MDFIQ99750 246 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 SH2D3AQ9BRG2 576 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 MSTO1Q9BUK6 570 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 FAM129AQ9BZQ8 928 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 IMPG2Q9BZV3 1241 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 WNT8AQ9H1J5 351 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 EPC1Q9H2F5 836 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 FZD8Q9H461 694 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.17□□□□□ -1.266e-7■■■■■ 62.1
CTNNA1-228ENST00000521640 GDF3Q9NR23 364 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 RBAKQ9NYW8 714 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 ERAP1Q9NZ08 941 aa7.17□□□□□ -1.26
CTNNA1-228ENST00000521640 GOLGA6L10A0A0M3HER8 536 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CCDC66A2RUB6 948 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 ACKR2O00590 384 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 ABLIM1O14639 778 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 KCNK3O14649 394 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CLDN3O15551 220 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 NCK2O43639 380 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 B4GALT4O60513 344 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 SEC31AO94979 1220 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 IL18RAPO95256 599 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 GH1P01241 217 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 HLA-DRAP01903 254 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 TFRCP02786 760 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 FTLP02792 175 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 PRKCBP05771 671 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 TXNP10599 105 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CHRNB2P17787 502 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 GBP1P32455 592 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 PIK3CAP42336 1068 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 SLC1A1P43005 524 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 SOX10P56693 466 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 NLRP11P59045 1033 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 PTENP60484 403 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 YWHAEP62258 255 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CBX1P83916 185 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CDC42EP1Q00587 391 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 SP4Q02446 784 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 ARHGAP1Q07960 439 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 LAMTOR4Q0VGL1 99 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 PTP4A2Q12974 167 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CUL1Q13616 776 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CUL2Q13617 745 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 GRB14Q14449 540 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 PCBP1Q15365 356 aaKnown RBP eCLIP7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 LY6KQ17RY6 165 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 FAM110CQ1W6H9 321 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 CLEC16AQ2KHT3 1053 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 HSDL1Q3SXM5 330 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 SPDYCQ5MJ68 293 aa7.16□□□□□ -1.26
CTNNA1-228ENST00000521640 TDRD10Q5VZ19 366 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms