RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 OSTM1Q86WC4 334 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 RPUSD2Q8IZ73 545 aaKnown RBP16.07■□□□□ 0.16
SREK1-209ENST00000520953 URGCPQ8TCY9 931 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 TFAP2BQ92481 460 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 ZNF560Q96MR9 790 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 DEF6Q9H4E7 631 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 NRDE2Q9H7Z3 1164 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 TAS2R14Q9NYV8 317 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 RCCD1A6NED2 376 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 AKR1B10O60218 316 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 CILPO75339 1184 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 BRD2P25440 801 aaKnown RBP16.07■□□□□ 0.16
SREK1-209ENST00000520953 LMO2P25791 158 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 NDST1P52848 882 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 RAD23BP54727 409 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 TMEM173Q86WV6 379 aaPredicted RBP16.07■□□□□ 0.16
SREK1-209ENST00000520953 DPEP3Q9H4B8 488 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 CDH23Q9H251 3354 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 ABHD14A-ACY1A0A1B0GW23 586 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 SSU72P8A0A1W2PR75 194 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 NT5C1B-RDH14C9J2C7 533 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 OR1G1P47890 313 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 FMO1Q01740 532 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 FPGSQ05932 587 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 NAA30Q147X3 362 aaPredicted RBP16.06■□□□□ 0.16
SREK1-209ENST00000520953 SV2CQ496J9 727 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 WSCD1Q658N2 575 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 PDCL2Q8N4E4 241 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 SLC4A11Q8NBS3 891 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 ANKRD7Q92527 254 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 TOP1MTQ969P6 601 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 SENP8Q96LD8 212 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 AGPAT1Q99943 283 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.06■□□□□ 0.168e-9■■□□□ 12.5
SREK1-209ENST00000520953 PACSIN1Q9BY11 444 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 SEPT11Q9NVA2 429 aaKnown RBP16.06■□□□□ 0.16
SREK1-209ENST00000520953 GDAP2Q9NXN4 497 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 TRIM10Q9UDY6 481 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 PUF60Q9UHX1 559 aaKnown RBP16.06■□□□□ 0.16
SREK1-209ENST00000520953 DNAI1Q9UI46 699 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 TMCO5BA8MYB1 307 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 CYB561D2O14569 222 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 DGKIO75912 1065 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 GNA15P30679 374 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 RPL9P32969 192 aaKnown RBP16.06■□□□□ 0.16
SREK1-209ENST00000520953 BCAR1P56945 870 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 DPF3Q92784 378 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 JAKMIP2Q96AA8 810 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 L2HGDHQ9H9P8 463 aa16.06■□□□□ 0.16
SREK1-209ENST00000520953 CHD7Q9P2D1 2997 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 GOLGA6L9A6NEM1 432 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 PDGFRBP09619 1106 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 P4HA1P13674 534 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 PNPLA4P41247 253 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 INCA1Q0VD86 236 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 TMEM240Q5SV17 173 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 CCDC170Q8IYT3 715 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 C12orf29Q8N999 325 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 BCL7CQ8WUZ0 217 aaPredicted RBP16.05■□□□□ 0.16
SREK1-209ENST00000520953 FAM81BQ96LP2 452 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 CYP3A43Q9HB55 503 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 TNRC18O15417 2968 aaPredicted RBP16.05■□□□□ 0.16
SREK1-209ENST00000520953 CHD9Q3L8U1 2897 aa16.05■□□□□ 0.16
SREK1-209ENST00000520953 EIF3CLB5ME19 914 aaKnown RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 ACAT1P24752 427 aaKnown RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 SLC11A1P49279 550 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 AARSP49588 968 aaKnown RBP eCLIP16.04■□□□□ 0.16
SREK1-209ENST00000520953 PDE6CP51160 858 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 DPH6Q7L8W6 267 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 OR6B3Q8NGW1 331 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 EIF3CQ99613 913 aaKnown RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 BARX2Q9UMQ3 279 aaPredicted RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 NENFQ9UMX5 172 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 NRP1O14786 923 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 THAP12O43422 761 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 AMHP03971 560 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 CYLC1P35663 651 aaPredicted RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 CDR2Q01850 454 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 PPIGQ13427 754 aaKnown RBP eCLIP16.04■□□□□ 0.162e-8■■□□□ 12.2
SREK1-209ENST00000520953 SLC18A3Q16572 532 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 KIAA0319Q5VV43 1072 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 DSTYKQ6XUX3 929 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 ACOT1Q86TX2 421 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 ADGRF2Q8IZF7 708 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 APPL2Q8NEU8 664 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 B3GALT6Q96L58 329 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 FAM193BQ96PV7 902 aaPredicted RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 LACRTQ9GZZ8 138 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 RC3H2Q9HBD1 1191 aaKnown RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 MARCH5Q9NX47 278 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 KANSL3Q9P2N6 904 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 NAGPAQ9UK23 515 aa16.04■□□□□ 0.16
SREK1-209ENST00000520953 BZW2Q9Y6E2 419 aaKnown RBP16.04■□□□□ 0.16
SREK1-209ENST00000520953 TSC2P49815 1807 aa16.03■□□□□ 0.16
SREK1-209ENST00000520953 HUS1O60921 280 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms