RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 MSRAQ9UJ68 235 aa6.51□□□□□ -1.37
FAM49B-218ENST00000520887 RCOR1Q9UKL0 485 aa6.51□□□□□ -1.37
FAM49B-218ENST00000520887 KCNH3Q9ULD8 1083 aa6.51□□□□□ -1.37
FAM49B-218ENST00000520887 PCDHA7Q9UN72 937 aa6.51□□□□□ -1.37
FAM49B-218ENST00000520887 PIN4Q9Y237 131 aaKnown RBP6.51□□□□□ -1.37
FAM49B-218ENST00000520887 ARID1BQ8NFD5 2236 aaPredicted RBP6.51□□□□□ -1.37
FAM49B-218ENST00000520887 LTBP2Q14767 1821 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 A0A087WZ62 844 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 K7ERI5 159 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 POLR2DO15514 142 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 HIP1RO75146 1068 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 LEFTY1O75610 366 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PRKCBP05771 671 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PLS3P13797 630 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 DARSP14868 501 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PFKFB1P16118 471 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 BMP6P22004 513 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PPP1R2P41236 205 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 YARSP54577 528 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PEX3P56589 373 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 UBE2HP62256 183 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 GRB10Q13322 594 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PRPF4BQ13523 1007 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 STIM1Q13586 685 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 BMS1Q14692 1282 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PLCL1Q15111 1095 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 KYAT1Q16773 422 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 DCAF4L1Q3SXM0 396 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 SPOUT1Q5T280 376 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 L1TD1Q5T7N2 865 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 RESP18Q5W5W9 173 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 RINT1Q6NUQ1 792 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 ZNF574Q6ZN55 896 aaPredicted RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 OTOP2Q7RTS6 562 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 KIAA0319LQ8IZA0 1049 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 SYCP3Q8IZU3 236 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PHOSPHO2Q8TCD6 241 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 URGCPQ8TCY9 931 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PRPF31Q8WWY3 499 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 HVCN1Q96D96 273 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 EPSTI1Q96J88 318 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 RPS6KC1Q96S38 1066 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 YME1L1Q96TA2 773 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 SH2D3AQ9BRG2 576 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 FDXACB1Q9BRP7 624 aaPredicted RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 TCHPQ9BT92 498 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 MRPL9Q9BYD2 267 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 MRPL4Q9BYD3 311 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 NFKBIZQ9BYH8 718 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 WNT8AQ9H1J5 351 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 MRPL44Q9H9J2 332 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 CHST12Q9NRB3 414 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PPM1HQ9ULR3 514 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 R3HCC1Q9Y3T6 440 aaKnown RBP6.5□□□□□ -1.37
FAM49B-218ENST00000520887 RWDD3Q9Y3V2 267 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 PCDHB7Q9Y5E2 793 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 EVPLQ92817 2033 aa6.5□□□□□ -1.37
FAM49B-218ENST00000520887 MYH11P35749 1972 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 TRIP12Q14669 1992 aaPredicted RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 IGKV6-21A0A0C4DH24 114 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 TMEM150BA6NC51 233 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 ENC1O14682 589 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 XPOTO43592 962 aaKnown RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 GCNT3O95395 438 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 MBD3O95983 291 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 CXCL10P02778 98 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 ACRP10323 421 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 ATP2A2P16615 1042 aaKnown RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 CD52P31358 61 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 LIG4P49917 911 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 SLC12A3P55017 1021 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 PTENP60484 403 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 FAM160A1Q05DH4 1040 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 RAD51AP2Q09MP3 1159 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 TRIM71Q2Q1W2 868 aaKnown RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 TSNAXIP1Q2TAA8 658 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 PLEKHG4Q58EX7 1191 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 HERC4Q5GLZ8 1057 aaPredicted RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 MARCH8Q5T0T0 291 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 CNNM4Q6P4Q7 775 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 ZNF365Q70YC5 407 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 HS2ST1Q7LGA3 356 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 WFDC3Q8IUB2 231 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 DBF4BQ8NFT6 615 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 GRIN3AQ8TCU5 1115 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 HERVK_113Q902F9 699 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 DHX38Q92620 1227 aaKnown RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 FAM193BQ96PV7 902 aaPredicted RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 GDF15Q99988 308 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 CCDC94Q9BW85 323 aaPredicted RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 TMEM206Q9H813 350 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 UBN1Q9NPG3 1134 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 TOPORSQ9NS56 1045 aaPredicted RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 PANK4Q9NVE7 773 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 CACNA2D2Q9NY47 1150 aa6.49□□□□□ -1.37
FAM49B-218ENST00000520887 WRAP73Q9P2S5 460 aaPredicted RBP6.49□□□□□ -1.37
FAM49B-218ENST00000520887 PADI3Q9ULW8 664 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms