RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PPP6R2O75170 966 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 GARTP22102 1010 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 PNPLA4P41247 253 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 ME1P48163 572 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 TSPY1Q01534 308 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 CENPPQ6IPU0 288 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 CRELD2Q6UXH1 353 aaPredicted RBP17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 ZSWIM2Q8NEG5 633 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 SHKBP1Q8TBC3 707 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 GIPC2Q8TF65 315 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 ZSWIM3Q96MP5 696 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 LPIN3Q9BQK8 851 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 TNMDQ9H2S6 317 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 LTB4R2Q9NPC1 389 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 FAM13BQ9NYF5 915 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 MRPS17Q9Y2R5 130 aaKnown RBP17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 R4GN57 208 aa17.41■□□□□ 0.38
IGHV3-42-201ENST00000520410 PRR23AA6NEV1 266 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 ZNF263O14978 683 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 NCAM2O15394 837 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 LAMTOR5O43504 91 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 EXTL3O43909 919 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 HUS1O60921 280 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 VNN2O95498 520 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 YEATS4O95619 227 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 ZSCAN22P10073 491 aaPredicted RBP17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 GABRR2P28476 465 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 GPR158Q5T848 1215 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 LMBRD2Q68DH5 695 aaPredicted RBP17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 ZC3H14Q6PJT7 736 aaKnown RBP17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 ZNF852Q6ZMS4 543 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 NT5DC4Q86YG4 428 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 C1orf210Q8IVY1 113 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 DCP1BQ8IZD4 617 aaKnown RBP17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 GPD1LQ8N335 351 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 CSGALNACT2Q8N6G5 542 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 CSGALNACT1Q8TDX6 532 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 IRF7Q92985 503 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 SNX21Q969T3 373 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 ANKRD36BP1Q96IX9 119 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 FAM84AQ96KN4 292 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 ZCWPW1Q9H0M4 648 aa17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 MTF2Q9Y483 593 aaPredicted RBP17.4■□□□□ 0.38
IGHV3-42-201ENST00000520410 HEPACAM2A8MVW5 462 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 NRG2O14511 850 aaPredicted RBP17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 MICAL2O94851 1124 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 F13A1P00488 732 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 TNNC2P02585 160 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 CYP11A1P05108 521 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 PSMC3P17980 439 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 FCARP24071 287 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 TUFMP49411 452 aaKnown RBP17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 CYP4F8P98187 520 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 STXBP5Q5T5C0 1151 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 VITQ6UXI7 678 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 DNAJB7Q7Z6W7 309 aaPredicted RBP17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 DEPDC1BQ8WUY9 529 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 DNASE1L2Q92874 299 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 STRA6Q9BX79 667 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 MTMR12Q9C0I1 747 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 GPR88Q9GZN0 384 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 DNAJC25Q9H1X3 360 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 CUEDC2Q9H467 287 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 PDE11AQ9HCR9 933 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 ZNF334Q9HCZ1 680 aaPredicted RBP17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 MAGED2Q9UNF1 606 aaPredicted RBP17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 ASB3Q9Y575 518 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 TSC2P49815 1807 aa17.39■□□□□ 0.37
IGHV3-42-201ENST00000520410 PROB1E7EW31 1015 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 MOSPD3O75425 235 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 FGF19O95750 216 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 ACAT1P24752 427 aaKnown RBP17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 TARSP26639 723 aaKnown RBP17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 KPNA1P52294 538 aaPredicted RBP17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 WNT7BP56706 349 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 MYL7Q01449 175 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 POU5F1Q01860 360 aaKnown RBP17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 POTEHQ6S545 545 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 TMC8Q8IU68 726 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 NELFCDQ8IXH7 590 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 RDH13Q8NBN7 331 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 GLIS3Q8NEA6 775 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 TTC16Q8NEE8 873 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 SPPL2BQ8TCT7 592 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 PSMG2Q969U7 264 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 PI4K2AQ9BTU6 479 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 BLZF1Q9H2G9 400 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 DDX43Q9NXZ2 648 aaKnown RBP17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 ITGA11Q9UKX5 1188 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 PCDHB5Q9Y5E4 795 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 SNX9Q9Y5X1 595 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 PIAS3Q9Y6X2 628 aa17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 MORC2Q9Y6X9 1032 aaPredicted RBP17.38■□□□□ 0.37
IGHV3-42-201ENST00000520410 TCHHQ07283 1943 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 NOTCH4Q99466 2003 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 FRMD3A2A2Y4 597 aa17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 PRPF40AO75400 957 aaKnown RBP17.37■□□□□ 0.37
IGHV3-42-201ENST00000520410 GLULP15104 373 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms