RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SOAT2O75908 522 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 NDUFA10O95299 355 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 TRIM27P14373 513 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 PHKG2P15735 406 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 NPR1P16066 1061 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 HDCP19113 662 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 EN2P19622 333 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 DDX6P26196 483 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 PHKA1P46020 1223 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF135P52742 658 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 ARFIP2P53365 341 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 CXADRP78310 365 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 HSD11B2P80365 405 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 TAP2Q03519 686 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 EXOSC9Q06265 439 aaKnown RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 SEMA5AQ13591 1074 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 GALEQ14376 348 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 POLD3Q15054 466 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 LSM12Q3MHD2 195 aaKnown RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 AMOTQ4VCS5 1084 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 B3GNTL1Q67FW5 361 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 APOA5Q6Q788 366 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 RHOUQ7L0Q8 258 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 C11orf96Q7Z7L8 435 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 IL31RAQ8NI17 732 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 TIFAQ96CG3 184 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 NT5C1BQ96P26 610 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 SMOQ99835 787 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZSWIM1Q9BR11 485 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 TLR10Q9BXR5 811 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 TEX101Q9BY14 249 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 C22orf23Q9BZE7 217 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 TINAGL1Q9GZM7 467 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF768Q9H5H4 540 aaKnown RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 ATP6V0A4Q9HBG4 840 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 GALNT9Q9HCQ5 603 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 HSFX1Q9UBD0 423 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 DKK2Q9UBU2 259 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 CDYLQ9Y232 598 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 MTO1Q9Y2Z2 717 aaKnown RBP4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 PLEKHM1Q9Y4G2 1056 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 ABCC9O60706 1549 aa4.1□□□□□ -1.75
HMGB1P41-201ENST00000520234 A0A1W2PS29 197 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 E9PLN8 166 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 MYO1FO00160 1098 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 POLRMTO00411 1230 aaKnown RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 MYL1P05976 194 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 ELANEP08246 267 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 MYF5P13349 255 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 KCNA2P16389 499 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 FBLP22087 321 aaKnown RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 NR4A1P22736 598 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 PEX2P28328 305 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 SLC7A1P30825 629 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 DGCR2P98153 550 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 RESTQ13127 1097 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 LY6G5CQ5SRR4 150 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 FAM160B1Q5W0V3 765 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 SP5Q6BEB4 398 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 SWSAP1Q6NVH7 229 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 TAPT1Q6NXT6 567 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF783Q6ZMS7 281 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 NOL8Q76FK4 1167 aaKnown RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 CLNKQ7Z7G1 428 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 ARHGEF19Q8IW93 802 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 CCAR1Q8IX12 1150 aaKnown RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 COLGALT2Q8IYK4 626 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 KRT78Q8N1N4 520 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 CPEB3Q8NE35 698 aaKnown RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 OR6B3Q8NGW1 331 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 POC1BQ8TC44 478 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 ZNF483Q8TF39 744 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 FUBP1Q96AE4 644 aaKnown RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 APIPQ96GX9 242 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 MOGAT1Q96PD6 335 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 TRIB1Q96RU8 372 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 VKORC1Q9BQB6 163 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 TRIM54Q9BYV2 358 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 DPH1Q9BZG8 443 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 NUP62CLQ9H1M0 184 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 BHMT2Q9H2M3 363 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 NRDE2Q9H7Z3 1164 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 GPRC5BQ9NZH0 403 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 USP25Q9UHP3 1055 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 REXO2Q9Y3B8 237 aaKnown RBP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 AATKQ6ZMQ8 1374 aa4.09□□□□□ -1.75
HMGB1P41-201ENST00000520234 PRAMEF33A0A0G2JMD5 474 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 ANO9A1A5B4 782 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 FOXN3O00409 490 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 TBC1D4O60343 1298 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 PRAMEF10O60809 474 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 CDKL5O76039 1030 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 FOSP01100 380 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 KITP10721 976 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 PIM1P11309 404 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 CYP2C9P11712 490 aa4.08□□□□□ -1.76
HMGB1P41-201ENST00000520234 MAKP20794 623 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms