RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 TRIOO75962 3097 aa14.33□□□□□ -0.12
VEGFA-219ENST00000518824 NARSO43776 548 aaKnown RBP14.32□□□□□ -0.12
VEGFA-219ENST00000518824 XYLBO75191 536 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 PDGFBP01127 241 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-219ENST00000518824 TNNC2P02585 160 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 LRG1P02750 347 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 RHOP08100 348 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 LAMP2P13473 410 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 GJA1P17302 382 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 MYBPC2Q14324 1141 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 SURF1Q15526 300 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 SOWAHAQ2M3V2 549 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 SLC39A12Q504Y0 691 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 ZCWPW2Q504Y3 356 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 CENPPQ6IPU0 288 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 HFE2Q6ZVN8 426 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 SLC9A9Q8IVB4 645 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 LRRC52Q8N7C0 313 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 STKLD1Q8NE28 680 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 PARD3BQ8TEW8 1205 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 ACSF2Q96CM8 615 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-219ENST00000518824 HPDLQ96IR7 371 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 CORO1BQ9BR76 489 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 KCNK12Q9HB15 430 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 GDAP2Q9NXN4 497 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 CGNQ9P2M7 1197 aaKnown RBP14.32□□□□□ -0.12
VEGFA-219ENST00000518824 TRAF3IP3Q9Y228 551 aa14.32□□□□□ -0.12
VEGFA-219ENST00000518824 ATP2C2O75185 946 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 MOSPD3O75425 235 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 VNN1O95497 513 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 POU2F2P09086 479 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 CEBPBP17676 345 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 PNPLA4P41247 253 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 PRCPP42785 496 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 PMS1P54277 932 aaKnown RBP14.31□□□□□ -0.12
VEGFA-219ENST00000518824 MYL6P60660 151 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 PABPC1LQ4VXU2 614 aaKnown RBP14.31□□□□□ -0.12
VEGFA-219ENST00000518824 PRSS36Q5K4E3 855 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 TDRD10Q5VZ19 366 aaKnown RBP14.31□□□□□ -0.12
VEGFA-219ENST00000518824 CEP135Q66GS9 1140 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 TRIM67Q6ZTA4 783 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 GUF1Q8N442 669 aaKnown RBP14.31□□□□□ -0.12
VEGFA-219ENST00000518824 SPATA20Q8TB22 786 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 GOLGA5Q8TBA6 731 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 KBTBD7Q8WVZ9 684 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 FGF13Q92913 245 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 ASIC4Q96FT7 647 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 FNBP1Q96RU3 617 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 LPIN3Q9BQK8 851 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 EPS15L1Q9UBC2 864 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 SORCS3Q9UPU3 1222 aa14.31□□□□□ -0.12
VEGFA-219ENST00000518824 TMEM221A6NGB7 291 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 M0R296 226 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 AKAP3O75969 853 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 C4BPAP04003 597 aaKnown RBP14.3□□□□□ -0.12
VEGFA-219ENST00000518824 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
VEGFA-219ENST00000518824 PAX3P23760 479 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 LMO2P25791 158 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 GPR15P49685 360 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 PARM1Q6UWI2 310 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 RTL10Q7L3V2 364 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 METTL23Q86XA0 190 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 NPAS3Q8IXF0 933 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 ADGRF2Q8IZF7 708 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 TMEM174Q8WUU8 243 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 FGF14Q92915 247 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
VEGFA-219ENST00000518824 MCRS1Q96EZ8 462 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 TIGD1Q96MW7 591 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 PKMYT1Q99640 499 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 MRPL45Q9BRJ2 306 aaKnown RBP14.3□□□□□ -0.12
VEGFA-219ENST00000518824 LRRC3Q9BY71 257 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 XYLT2Q9H1B5 865 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 ZNF334Q9HCZ1 680 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-219ENST00000518824 DDX43Q9NXZ2 648 aaKnown RBP14.3□□□□□ -0.12
VEGFA-219ENST00000518824 MAN1B1Q9UKM7 699 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 DSEQ9UL01 958 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 CDH7Q9ULB5 785 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 COL4A3Q01955 1670 aa14.3□□□□□ -0.12
VEGFA-219ENST00000518824 TRIM49BA6NDI0 452 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 GABRDO14764 452 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 CALUO43852 315 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-219ENST00000518824 HUS1O60921 280 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 LRRN2O75325 713 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 TRIM49P0CI25 452 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 TRIM49CP0CI26 452 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 PTPN2P17706 415 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 ATF6P18850 670 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 COL9A1P20849 921 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 BMP6P22004 513 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 NR2F2P24468 414 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 ANP32AP39687 249 aaKnown RBP14.29□□□□□ -0.12
VEGFA-219ENST00000518824 CLDN10P78369 228 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 HTR4Q13639 388 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 IER5LQ5T953 404 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 SDHAF4Q5VUM1 108 aa14.29□□□□□ -0.12
VEGFA-219ENST00000518824 TMC8Q8IU68 726 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms