RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 RPS13P62277 151 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 IRX1P78414 480 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PHEXP78562 749 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 HSD11B2P80365 405 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZFP36L1Q07352 338 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ARL16Q0P5N6 197 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 MAP4K2Q12851 820 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GTF2H3Q13889 308 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ELOAQ14241 798 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PLAC9Q5JTB6 97 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 Q5PR19 223 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SLC25A30Q5SVS4 291 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ACBD5Q5T8D3 534 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TSHZ3Q63HK5 1081 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PLA2G4FQ68DD2 849 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZSCAN25Q6NSZ9 544 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ARHGAP11AQ6P4F7 1023 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 OLFM4Q6UX06 510 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 H1FNTQ75WM6 255 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TRMT1LQ7Z2T5 733 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FAM217AQ8IXS0 508 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GALNT4Q8N4A0 578 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 IL17RCQ8NAC3 791 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NFAM1Q8NET5 270 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ENGASEQ8NFI3 743 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TOR1AIP2Q8NFQ8 470 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CADM4Q8NFZ8 388 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 OR5AN1Q8NGI8 311 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 OR5M3Q8NGP4 307 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZFP28Q8NHY6 868 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FAM76AQ8TAV0 307 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DEPTORQ8TB45 409 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CALML6Q8TD86 181 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 STK32AQ8WU08 396 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 LPIN2Q92539 896 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TFAP2CQ92754 450 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RFKQ969G6 155 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RUNDC1Q96C34 613 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KLHL29Q96CT2 875 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZNF501Q96CX3 271 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FUBP3Q96I24 572 aaKnown RBP eCLIP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RCC1LQ96I51 464 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 IGSF21Q96ID5 467 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 WDR92Q96MX6 357 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CITED4Q96RK1 184 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SLC9A7Q96T83 725 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 OSBPL7Q9BZF2 842 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PPP1R12CQ9BZL4 782 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RTN4RQ9BZR6 473 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 REXO4Q9GZR2 422 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NIF3L1Q9GZT8 377 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 GBP3Q9H0R5 595 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PDZD7Q9H5P4 517 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KCNMB3Q9NPA1 279 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 KLC4Q9NSK0 619 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 POLR3BQ9NW08 1133 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 OGFRQ9NZT2 677 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FAM8A1Q9UBU6 413 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 POMT2Q9UKY4 750 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 G3BP2Q9UN86 482 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 COG5Q9UP83 839 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ZBTB1Q9Y2K1 713 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 COG6Q9Y2V7 657 aa-0.41□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NID2Q14112 1375 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NDUFAF8A1L188 74 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FAM172BPA6NC97 362 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FAM90A27PA6NNH2 459 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TBKBP1A7MCY6 615 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 VWC2LB2RUY7 222 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 UBE2Q2LH0YL09 131 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ARNTLO00327 626 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NKRFO15226 690 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PPM1BO75688 479 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 A1BGP04217 495 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 TP53P04637 393 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FGF5P12034 268 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FCGR1AP12314 374 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ACADSP16219 412 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NDUFB7P17568 137 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 AMD1P17707 334 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 RXRAP19793 462 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CASRP41180 1078 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PTGER3P43115 390 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 NKX2-1P43699 371 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CCR10P46092 362 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CLK1P49759 484 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PDLIM4P50479 330 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 DRG2P55039 364 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ANTXR2P58335 489 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PSG6Q00889 435 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 B4GALNT1Q00973 533 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 POU5F1Q01860 360 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 FKBP4Q02790 459 aaKnown RBP eCLIP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 LMNB2Q03252 620 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 PRB3Q04118 309 aaPredicted RBP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ITIH3Q06033 890 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CRYZQ08257 329 aaKnown RBP-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 CYP4F3Q08477 520 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 SPIRE1Q08AE8 756 aa-0.42□□□□□ -2.48
RNU6-1238P-201ENST00000517215 ST3GAL1Q11201 340 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms