RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 MANSC4A6NHS7 340 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ZNF785A8K8V0 405 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 ALG1L2C9J202 215 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 F2RL2O00254 374 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 DTNBO60941 627 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GNAI2P04899 355 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 PRKCGP05129 697 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GJB1P08034 283 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 FTH1P19P0C7X4 201 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 NDUFB7P17568 137 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CDK11BP21127 795 aaKnown RBP3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GRM1Q13255 1194 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SNAPC2Q13487 334 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 MTMR1Q13613 665 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 BMPR2Q13873 1038 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 FAM50AQ14320 339 aaKnown RBP3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 PCBP2Q15366 365 aaKnown RBP eCLIP3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 PTPN21Q16825 1174 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 SLC4A10Q6U841 1118 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CAMKK1Q8N5S9 505 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 NSUN6Q8TEA1 469 aaKnown RBP3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 LRIG1Q96JA1 1093 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 OSBPL9Q96SU4 736 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 CCDC8Q9H0W5 538 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 VSX1Q9NZR4 365 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 RAD54BQ9Y620 910 aa3.72□□□□□ -1.81
RNU6-1088P-201ENST00000516850 GABRDO14764 452 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SLC16A6O15403 523 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 NXPH3O95157 252 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 EBLN1P0CF75 366 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZFXP17010 805 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PIK3CGP48736 1102 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ALDH9A1P49189 494 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CCT8P50990 548 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 HNRNPMP52272 730 aaKnown RBP eCLIP3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF135P52742 658 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 HABP2Q14520 560 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 EZH2Q15910 746 aaKnown RBP3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TEDDM1Q5T9Z0 273 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TMPRSS9Q7Z410 1059 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PSD4Q8NDX1 1056 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FBXO41Q8TF61 875 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 DDX17Q92841 729 aaKnown RBP3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FKBP10Q96AY3 582 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 DMRTA2Q96SC8 542 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ACTRT3Q9BYD9 372 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 AMBRA1Q9C0C7 1298 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SPEF1Q9Y4P9 236 aa3.71□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ADGRA2Q96PE1 1338 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 E9PLN8 166 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 VPS4BO75351 444 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 KATNA1O75449 491 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ERBB2P04626 1255 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FAM163BP0C2L3 166 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ELFN1P0C7U0 828 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 RARBP10826 455 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CD6P30203 668 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF81P51508 661 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PROK1P58294 105 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SLC10A2Q12908 348 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 LLGL1Q15334 1064 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TBCCQ15814 346 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CCDC157Q569K6 752 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SFRP4Q6FHJ7 346 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TAF2Q6P1X5 1199 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CEP85Q6P2H3 762 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ZNF551Q7Z340 670 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CPA6Q8N4T0 437 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 ATRIPQ8WXE1 791 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TNPO1Q92973 898 aaKnown RBP3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FAM136AQ96C01 138 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 NELL2Q99435 816 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 VKORC1Q9BQB6 163 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SLC13A1Q9BZW2 595 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 WDCPQ9H6R7 721 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 WDR26Q9H7D7 661 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 GPR35Q9HC97 309 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 FEZ2Q9UHY8 353 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PCDHA3Q9Y5H8 950 aa3.7□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SBNO2Q9Y2G9 1366 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 WDR27A2RRH5 827 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 WDR91A4D1P6 747 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 VWC2LB2RUY7 222 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SNUPNO95149 360 aaKnown RBP3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 HNRNPCP07910 306 aaKnown RBP eCLIP3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 RHOP08100 348 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CELA2AP08217 269 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 CHRM3P20309 590 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 LPOP22079 712 aaPredicted RBP3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PRDX5P30044 214 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PHKA1P46020 1223 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 DSC2Q02487 901 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 KIF22Q14807 665 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 TMEM119Q4V9L6 283 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 RBM20Q5T481 1227 aaKnown RBP3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 PAPD7Q5XG87 772 aaKnown RBP3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 LAYNQ6UX15 382 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 USP37Q86T82 979 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 GLCCI1Q86VQ1 547 aa3.69□□□□□ -1.82
RNU6-1088P-201ENST00000516850 SEMA6DQ8NFY4 1073 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms