RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 OSMP13725 252 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 AGXTP21549 392 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 DDX6P26196 483 aaKnown RBP eCLIP4.5□□□□□ -1.69
CAST-242ENST00000515063 GUCY1A2P33402 732 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 USP14P54578 494 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 RAP2BP61225 183 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 GUCY1B3Q02153 619 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 EIF4A2Q14240 407 aaKnown RBP4.5□□□□□ -1.69
CAST-242ENST00000515063 CLUL1Q15846 466 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 BEAN1Q3B7T3 259 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 SPDYE7PQ495Y7 208 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 AFMIDQ63HM1 303 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 OTUD7BQ6GQQ9 843 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 Q6ZVL8 140 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 DDX42Q86XP3 938 aaKnown RBP eCLIP4.5□□□□□ -1.69
CAST-242ENST00000515063 ARHGEF19Q8IW93 802 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 CNTD1Q8N815 330 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 SUPT20HQ8NEM7 779 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 REPS2Q8NFH8 660 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 HOXB13Q92826 284 aaPredicted RBP4.5□□□□□ -1.69
CAST-242ENST00000515063 FUBP3Q96I24 572 aaKnown RBP eCLIP4.5□□□□□ -1.69
CAST-242ENST00000515063 C7orf25Q9BPX7 421 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 MRI1Q9BV20 369 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 MLST8Q9BVC4 326 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 ZNF768Q9H5H4 540 aaKnown RBP4.5□□□□□ -1.69
CAST-242ENST00000515063 DCTPP1Q9H773 170 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 ZNF277Q9NRM2 450 aaPredicted RBP4.5□□□□□ -1.69
CAST-242ENST00000515063 HOMER2Q9NSB8 354 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 FAM30AQ9NZY2 134 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 CHMP5Q9NZZ3 219 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 PACSIN3Q9UKS6 424 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 DNM3Q9UQ16 869 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 USP15Q9Y4E8 981 aaPredicted RBP4.5□□□□□ -1.69
CAST-242ENST00000515063 PCDHGA2Q9Y5H1 932 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 DMRT1Q9Y5R6 373 aa4.5□□□□□ -1.69
CAST-242ENST00000515063 PHRF1Q9P1Y6 1649 aaKnown RBP4.5□□□□□ -1.69
CAST-242ENST00000515063 CHD2O14647 1828 aaKnown RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 CRB1P82279 1406 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 PIK3C2AO00443 1686 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 ZNF142P52746 1687 aaPredicted RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 DRGXA6NNA5 263 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 GPR32O75388 356 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 NDUFA10O95299 355 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 SLC16A1P53985 500 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 AMPD3Q01432 767 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 PPP3CAQ08209 521 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 FSTL1Q12841 308 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 PDCD4Q53EL6 469 aaKnown RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 L1TD1Q5T7N2 865 aaKnown RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 FAM102AQ5T9C2 384 aaPredicted RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 AGAP9Q5VTM2 703 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 MIGA2Q7L4E1 593 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 SYT12Q8IV01 421 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 HSCBQ8IWL3 235 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 RHOT2Q8IXI1 618 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 LCORLQ8N3X6 602 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 ANKRD44Q8N8A2 993 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 C8orf58Q8NAV2 365 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 CPEB3Q8NE35 698 aaKnown RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.49□□□□□ -1.69
CAST-242ENST00000515063 SLC35B2Q8TB61 432 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 RNPEPQ9H4A4 650 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 DMRT3Q9NQL9 472 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 TYW1Q9NV66 732 aaKnown RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 MKS1Q9NXB0 559 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 AJAP1Q9UKB5 411 aaPredicted RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 ISY1Q9ULR0 285 aaKnown RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 MRFAP1Q9Y605 127 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 RGPD8O14715 1765 aaPredicted RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 ATRNL1Q5VV63 1379 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 MARF1Q9Y4F3 1742 aaKnown RBP4.49□□□□□ -1.69
CAST-242ENST00000515063 PXDNLA1KZ92 1463 aa4.49□□□□□ -1.69
CAST-242ENST00000515063 IGSF1Q8N6C5 1336 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 RGS12O14924 1447 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 CENPVL1A0A0U1RR11 272 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 EPB41L2O43491 1005 aaKnown RBP4.48□□□□□ -1.69
CAST-242ENST00000515063 HMMRO75330 724 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 FRAT2O75474 233 aaPredicted RBP4.48□□□□□ -1.69
CAST-242ENST00000515063 FOSP01100 380 aaPredicted RBP4.48□□□□□ -1.69
CAST-242ENST00000515063 KRT4P19013 534 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 CCT4P50991 539 aaKnown RBP4.48□□□□□ -1.69
CAST-242ENST00000515063 GUCY2FP51841 1108 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 CHN2P52757 468 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 FAM189BP81408 668 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 CREMQ03060 361 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 RRS1Q15050 365 aaKnown RBP4.48□□□□□ -1.69
CAST-242ENST00000515063 ANKRD45Q5TZF3 282 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 SULT6B1Q6IMI4 303 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 MED25Q71SY5 747 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 TSPYL6Q8N831 410 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 PRPF38AQ8NAV1 312 aaKnown RBP4.48□□□□□ -1.69
CAST-242ENST00000515063 OR56A1Q8NGH5 318 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 ZG16BQ96DA0 208 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 TOR3AQ9H497 397 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 SERHL2Q9H4I8 314 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 RNF181Q9P0P0 153 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 NOX1Q9Y5S8 564 aa4.48□□□□□ -1.69
CAST-242ENST00000515063 FAM208AQ9UK61 1670 aaKnown RBP4.48□□□□□ -1.69
CAST-242ENST00000515063 SETD1BQ9UPS6 1966 aaKnown RBP4.47□□□□□ -1.69
CAST-242ENST00000515063 ATP10DQ9P241 1426 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms