RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	DMRT1	Q9Y5R6	373 aa		4.15	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PIP5K1C	O60331	668 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FGF18	O76093	207 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	IL18RAP	O95256	599 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MAL	P21145	153 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TGM1	P22735	817 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SMARCA1	P28370	1054 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	APOBEC3A	P31941	199 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PTPN7	P35236	360 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PPM1A	P35813	382 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SLC6A9	P48067	706 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CCT5	P48643	541 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PPM1F	P49593	454 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NHLH2	Q02577	135 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TLE1	Q04724	770 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	BEAN1	Q3B7T3	259 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PRAMEF14	Q5SWL7	426 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GADL1	Q6ZQY3	521 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267		Q6ZVL8	140 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZNF354C	Q86Y25	554 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RHOT2	Q8IXI1	618 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	LCORL	Q8N3X6	602 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SPATA5	Q8NB90	893 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MDM1	Q8TC05	714 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	IFI44	Q8TCB0	444 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZG16B	Q96DA0	208 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ISCA1	Q9BUE6	129 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CRB3	Q9BUF7	120 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PRDM16	Q9HAZ2	1276 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ZNF287	Q9HBT7	754 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SARS2	Q9NP81	518 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CNNM1	Q9NRU3	951 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PIH1D1	Q9NWS0	290 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SIDT1	Q9NXL6	827 aa	Known RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	OGDHL	Q9ULD0	1010 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SIK3	Q9Y2K2	1263 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PAXBP1	Q9Y5B6	917 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SNX13	Q9Y5W8	968 aa		4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.14	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	AHRR	A9YTQ3	701 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	KPNA5	O15131	536 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NBN	O60934	754 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	HKR1	P10072	659 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TSHR	P16473	764 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ATP5J	P18859	108 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	EN2	P19622	333 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DDX6	P26196	483 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ADSL	P30566	484 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SREBF1	P36956	1147 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GRK6	P43250	576 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	STT3A	P46977	705 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	DAG1	Q14118	895 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CNGA2	Q16280	664 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	KHDC1	Q4VXA5	237 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FAM209B	Q5JX69	171 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	EMC10	Q5UCC4	262 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	OTUD7B	Q6GQQ9	843 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TLDC1	Q6P9B6	456 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TRMT2A	Q8IZ69	625 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PQLC1	Q8N2U9	271 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	BRIX1	Q8TDN6	353 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	KBTBD7	Q8WVZ9	684 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TMEM41A	Q96HV5	264 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ARMT1	Q9H993	441 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CERS4	Q9HA82	394 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	AGO4	Q9HCK5	861 aa	Known RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ABCF2	Q9UG63	623 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RGS17	Q9UGC6	210 aa	Predicted RBP	4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PGAP2	Q9UHJ9	254 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GTF2A1L	Q9UNN4	478 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CORO2B	Q9UQ03	480 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	PCDHA3	Q9Y5H8	950 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	NOX1	Q9Y5S8	564 aa		4.13	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	LRRC14B	A6NHZ5	514 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CXorf49	A8MYA2	514 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ADAMTS3	O15072	1205 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ADCY6	O43306	1168 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TLR5	O60602	858 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	WDHD1	O75717	1129 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	POMC	P01189	267 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	LMNA	P02545	664 aa	Known RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TH	P07101	528 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	HSD3B1	P14060	373 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ALOX15	P16050	662 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CD53	P19397	219 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SLC7A1	P30825	629 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	GUCY1A2	P33402	732 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	IL6ST	P40189	918 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	TEC	P42680	631 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	RNASE9	P60153	205 aa	Known RBP	4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	CTXN1	P60606	82 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ATP8B2	P98198	1209 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	FMO1	Q01740	532 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	ICA1	Q05084	483 aa		4.12	□□□□□ -1.75
CALCOCO2-223	ENST00000514267	SNAPC2	Q13487	334 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms