RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 LONRF1Q17RB8 773 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 PREPLQ4J6C6 727 aaPredicted RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 TSHZ3Q63HK5 1081 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 DRICH1Q6PGQ1 229 aaPredicted RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 LAYNQ6UX15 382 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 SPOCD1Q6ZMY3 1216 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 PDSS2Q86YH6 399 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 ZNF808Q8N4W9 903 aaPredicted RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 IPCEF1Q8WWN9 437 aaPredicted RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 PNKPQ96T60 521 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 MNTQ99583 582 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 ELAC2Q9BQ52 826 aaKnown RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 LRFN3Q9BTN0 628 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 NDC1Q9BTX1 674 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 LSM14BQ9BX40 385 aaKnown RBP5.11□□□□□ -1.59
HTT-210ENST00000512909 KCNH6Q9H252 994 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 DDX21Q9NR30 783 aaKnown RBP eCLIP5.11□□□□□ -1.59
HTT-210ENST00000512909 SLC52A1Q9NWF4 448 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 CORO2BQ9UQ03 480 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 CDYLQ9Y232 598 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 NOX1Q9Y5S8 564 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 COMMD10Q9Y6G5 202 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 ATRNL1Q5VV63 1379 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 PTPRTO14522 1441 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 ANKRD50Q9ULJ7 1429 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 DUOX2Q9NRD8 1548 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 FAM135AQ9P2D6 1515 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 ARHGEF5Q12774 1597 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 REREQ9P2R6 1566 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 CAMSAP1Q5T5Y3 1602 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 C3P01024 1663 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 ADGBQ8N7X0 1667 aa5.11□□□□□ -1.59
HTT-210ENST00000512909 DIRC3C9JPN6 131 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 GPR42O15529 346 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 SCAF4O95104 1147 aaKnown RBP5.1□□□□□ -1.59
HTT-210ENST00000512909 ITGB3P05106 788 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 CKBP12277 381 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 MYF5P13349 255 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 HOXA5P20719 270 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 SELENOPP49908 381 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 SUMO3P55854 103 aaPredicted RBP5.1□□□□□ -1.59
HTT-210ENST00000512909 RHBDL3P58872 404 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 POU6F2P78424 691 aaPredicted RBP5.1□□□□□ -1.59
HTT-210ENST00000512909 NHLH2Q02577 135 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 SEMA5AQ13591 1074 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 ZNF585AQ6P3V2 769 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 PPP1R3BQ86XI6 285 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 FAM186BQ8IYM0 893 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 CCDC33Q8N5R6 958 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 SAMD3Q8N6K7 520 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 OR52N2Q8NGI0 321 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 SMCR8Q8TEV9 937 aaPredicted RBP5.1□□□□□ -1.59
HTT-210ENST00000512909 PARD3BQ8TEW8 1205 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 NUP133Q8WUM0 1156 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 APIPQ96GX9 242 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 NT5C1BQ96P26 610 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 DMRTA2Q96SC8 542 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 CNPPD1Q9BV87 410 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 BHMT2Q9H2M3 363 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 RNPEPQ9H4A4 650 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 AURKAIP1Q9NWT8 199 aaPredicted RBP5.1□□□□□ -1.59
HTT-210ENST00000512909 TRPM5Q9NZQ8 1165 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 SLC23A1Q9UHI7 598 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 INO80Q9ULG1 1556 aaPredicted RBP5.1□□□□□ -1.59
HTT-210ENST00000512909 SORCS3Q9UPU3 1222 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 TMX2Q9Y320 296 aa5.1□□□□□ -1.59
HTT-210ENST00000512909 KDM5DQ9BY66 1539 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 A2ML1A8K2U0 1454 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 TCOF1Q13428 1488 aaKnown RBP5.09□□□□□ -1.59
HTT-210ENST00000512909 DRGXA6NNA5 263 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 A6NNZ2 444 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 NT5C1B-RDH14C9J2C7 533 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 MUSKO15146 869 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 FRS3O43559 492 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 GRPP07492 148 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 SBK3P0C264 359 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 XRCC6P12956 609 aaKnown RBP eCLIP5.09□□□□□ -1.59
HTT-210ENST00000512909 RNASE9P60153 205 aaKnown RBP5.09□□□□□ -1.59
HTT-210ENST00000512909 SLC13A2Q13183 592 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 KIF22Q14807 665 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 CNGA2Q16280 664 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 APOA5Q6Q788 366 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 FAM90A1Q86YD7 464 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 DCBLD1Q8N8Z6 715 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 PLBD2Q8NHP8 589 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 IL31RAQ8NI17 732 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 CPT1CQ8TCG5 803 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 Q8TCH9 128 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 KBTBD7Q8WVZ9 684 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 SCAMP4Q969E2 229 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 CCDC138Q96M89 665 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 RPS6KC1Q96S38 1066 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 TBCBQ99426 244 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 BTBD1Q9H0C5 482 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 ZNF700Q9H0M5 742 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 NLRC4Q9NPP4 1024 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 SERHLQ9NQF3 203 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 FBXO34Q9NWN3 711 aa5.09□□□□□ -1.59
HTT-210ENST00000512909 PARPBPQ9NWS1 579 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms