RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CDC25CP30307 473 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 DDIT3P35638 169 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 ATXN1P54253 815 aaKnown RBP13.61□□□□□ -0.23
VEGFA-216ENST00000512683 AMPD2Q01433 879 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 GRIN1Q05586 938 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 VEPH1Q14D04 833 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 TSSK4Q6SA08 328 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 BRAPQ7Z569 592 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 GPBP1Q86WP2 473 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 ATAD1Q8NBU5 361 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 FAM200AQ8TCP9 573 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 MSTO1Q9BUK6 570 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 ATXN3LQ9H3M9 355 aa13.61□□□□□ -0.23
VEGFA-216ENST00000512683 CCDC163A0A0D9SF12 145 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 MED19A0JLT2 244 aaPredicted RBP13.6□□□□□ -0.23
VEGFA-216ENST00000512683 KRT18P05783 430 aaKnown RBP13.6□□□□□ -0.23
VEGFA-216ENST00000512683 GJA1P17302 382 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 TNFSF9P41273 254 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 SPAG1Q07617 926 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 TMEM132DQ14C87 1099 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 GAREM2Q75VX8 874 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 LONP2Q86WA8 852 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 DCP1BQ8IZD4 617 aaKnown RBP13.6□□□□□ -0.23
VEGFA-216ENST00000512683 SPPL2BQ8TCT7 592 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 EXOC4Q96A65 974 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 HVCN1Q96D96 273 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 GCNAQ96QF7 691 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 ZCWPW1Q9H0M4 648 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 BLOC1S4Q9NUP1 217 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 CDV3Q9UKY7 258 aaKnown RBP13.6□□□□□ -0.23
VEGFA-216ENST00000512683 SLC27A5Q9Y2P5 690 aa13.6□□□□□ -0.23
VEGFA-216ENST00000512683 DCHS1Q96JQ0 3298 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 NPHP3-ACAD11A0A0J9YXS1 232 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 SPECC1L-ADORA2AF8WAN1 911 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 K7ENM7 598 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 NRG2O14511 850 aaPredicted RBP13.59□□□□□ -0.23
VEGFA-216ENST00000512683 TBCAO75347 108 aaKnown RBP13.59□□□□□ -0.23
VEGFA-216ENST00000512683 OR4Q2P0C623 313 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 GABRR2P28476 465 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 PNPLA4P41247 253 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 TAF6P49848 677 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
VEGFA-216ENST00000512683 TAF12Q16514 161 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 GPR158Q5T848 1215 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 ADALQ6DHV7 355 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 JADE1Q6IE81 842 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 KRI1Q8N9T8 703 aaKnown RBP13.59□□□□□ -0.23
VEGFA-216ENST00000512683 BPIFB1Q8TDL5 484 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 RAD54LQ92698 747 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 FIZ1Q96SL8 496 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 CRISPLD1Q9H336 500 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 SEL1LQ9UBV2 794 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 ANK1P16157 1881 aa13.59□□□□□ -0.23
VEGFA-216ENST00000512683 NOTCH4Q99466 2003 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 VPS37CA5D8V6 355 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-216ENST00000512683 CYB561D2O14569 222 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 ATG13O75143 517 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 IL18RAPO95256 599 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 SYT1P21579 422 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 CTHP32929 405 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 SIM2Q14190 667 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-216ENST00000512683 CSRP2Q16527 193 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-216ENST00000512683 RASSF8Q8NHQ8 419 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 SPATA18Q8TC71 538 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 NETO1Q8TDF5 533 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 DDX1Q92499 740 aaKnown RBP13.58□□□□□ -0.24
VEGFA-216ENST00000512683 LARP4BQ92615 738 aaKnown RBP13.58□□□□□ -0.24
VEGFA-216ENST00000512683 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 LOXL4Q96JB6 756 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.24
VEGFA-216ENST00000512683 EXOC7Q9UPT5 735 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 CLIC4Q9Y696 253 aa13.58□□□□□ -0.24
VEGFA-216ENST00000512683 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 K7ESF4 209 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 HRO43593 1189 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 LDHAP00338 332 aaKnown RBP13.57□□□□□ -0.24
VEGFA-216ENST00000512683 HAPLN1P10915 354 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-216ENST00000512683 PLCG1P19174 1290 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 PDCP20941 246 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 GUCY2FP51841 1108 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 SATB1Q01826 763 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-216ENST00000512683 RESTQ13127 1097 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 CCINQ13939 588 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 GAS6Q14393 721 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 MCM6Q14566 821 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 KARSQ15046 597 aaKnown RBP13.57□□□□□ -0.24
VEGFA-216ENST00000512683 ITPRIPL2Q3MIP1 535 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 MGAT5BQ3V5L5 792 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 SV2CQ496J9 727 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 WDR5BQ86VZ2 330 aa13.57□□□□□ -0.24
VEGFA-216ENST00000512683 OR10T2Q8NGX3 314 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms