RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ZC3H12CQ9C0D7 883 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 C1orf21Q9H246 121 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 PRDM12Q9H4Q4 367 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 NCOR1P1Q9H4R4 102 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CABP5Q9NP86 173 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 CAMK2AQ9UQM7 478 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 FHOD1Q9Y613 1164 aa6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 DDX49Q9Y6V7 483 aaKnown RBP6.75□□□□□ -1.33
TRAPPC11-209ENST00000512476 PPRC1Q5VV67 1664 aaKnown RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 TAF4O00268 1085 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ARNTLO00327 626 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 KCNK3O14649 394 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 TBC1D4O60343 1298 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 MMP20O60882 483 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 SASH3O75995 380 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 GCNT3O95395 438 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 NPPAP01160 153 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 INHBAP08476 426 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 PLCG1P19174 1290 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 FGFR2P21802 821 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 AKT1P31749 480 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 DHPSP49366 369 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 HABP2Q14520 560 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 MXD4Q14582 209 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 FILIP1LQ4L180 1135 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ZNF697Q5TEC3 545 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 FAM160B2Q86V87 743 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 EFHBQ8N7U6 833 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 BBOF1Q8ND07 529 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 IL31RAQ8NI17 732 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ETNPPLQ8TBG4 499 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 PLPPR2Q96GM1 343 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 PKP4Q99569 1192 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 TAOK3Q9H2K8 898 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 COPS7BQ9H9Q2 264 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 HSPBP1Q9NZL4 362 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 USP15Q9Y4E8 981 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 PCDHGA5Q9Y5G8 931 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 PCDHGA1Q9Y5H4 931 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 MLH3Q9UHC1 1453 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 IQGAP3Q86VI3 1631 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 TONSLQ96HA7 1378 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 HECW2Q9P2P5 1572 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 NFKBIEO00221 500 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 MAGEB3O15480 346 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ASAP2O43150 1006 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 TNNT1P13805 278 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 NR2C2P49116 596 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 MAP2K6P52564 334 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 PROSER3Q2NL68 480 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 STYK1Q6J9G0 422 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 INTS5Q6P9B9 1019 aaKnown RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 INTS8Q75QN2 995 aaKnown RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 MAMDC2Q7Z304 686 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 PCDH19Q8TAB3 1148 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ANKS1AQ92625 1134 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ADAD1Q96M93 576 aaKnown RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ELF4Q99607 663 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 ISCUQ9H1K1 167 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 TMPRSS11EQ9UL52 423 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 CYP8B1Q9UNU6 501 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 TMEM5Q9Y2B1 443 aa6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 NOC2LQ9Y3T9 749 aaKnown RBP6.74□□□□□ -1.33
TRAPPC11-209ENST00000512476 KIF16BQ96L93 1317 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 IRS2Q9Y4H2 1338 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 EIF2AK4Q9P2K8 1649 aaKnown RBP6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 A0A1W2PQ09 198 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CCDC154A6NI56 674 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 TBKBP1A7MCY6 615 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 SHOXO15266 292 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 FAM155BO75949 473 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CT83Q5H943 113 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 C3orf38Q5JPI3 329 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 OTOAQ7RTW8 1153 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 PEX5LQ8IYB4 626 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 ANKRD53Q8N9V6 530 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 ANKK1Q8NFD2 765 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 OR56B2PQ8NGI1 322 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 SCAMP5Q8TAC9 235 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 CCHCR1Q8TD31 782 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 TUBGCP3Q96CW5 907 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 KLHL4Q9C0H6 718 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 SENP6Q9GZR1 1112 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 ZDHHC7Q9NXF8 308 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 HMG20BQ9P0W2 317 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 ZNF451Q9Y4E5 1061 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 PCDHA5Q9Y5H7 936 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 RPRD2Q5VT52 1461 aaKnown RBP6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 RICTORQ6R327 1708 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 DHX29Q7Z478 1369 aaKnown RBP6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 KIF13AQ9H1H9 1805 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 DEPDC5O75140 1603 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 SOWAHBA6NEL2 793 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 PODXLO00592 558 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 DVL2O14641 736 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 SCAMP1O15126 338 aa6.73□□□□□ -1.33
TRAPPC11-209ENST00000512476 VILLO15195 856 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms