RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CYLC2Q14093 348 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 SLC13A5Q86YT5 568 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 C3orf20Q8ND61 904 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 TPCN2Q8NHX9 752 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 CASKIN2Q8WXE0 1202 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 INPP5DQ92835 1189 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 NT5C1AQ9BXI3 368 aa11.07□□□□□ -0.64
NEK1-206ENST00000510533 FRMD8Q9BZ67 464 aaPredicted RBP11.07□□□□□ -0.64
NEK1-206ENST00000510533 IL18RAPO95256 599 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PDHBP11177 359 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 RFC5P40937 340 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 GPAT2Q6NUI2 795 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 C16orf86Q6ZW13 317 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 FAM162AQ96A26 154 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 TFR2Q9UP52 801 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 HECW2Q9P2P5 1572 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 LOC100653049A0A140TA62 436 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 E2F8A0AVK6 867 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 SUPT3HB4E1H0 165 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 ZNF263O14978 683 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 KRT34O76011 436 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 ACADSBP45954 432 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 CPA2P48052 419 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 DNAJC3Q13217 504 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 COG2Q14746 738 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 LRRC34Q8IZ02 419 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 LPAR1Q92633 364 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PABPC5Q96DU9 382 aaKnown RBP11.06□□□□□ -0.64
NEK1-206ENST00000510533 MAP3K14Q99558 947 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 EPB41L4AQ9HCS5 686 aaPredicted RBP11.06□□□□□ -0.64
NEK1-206ENST00000510533 DYRK4Q9NR20 520 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 DLGAP2Q9P1A6 1054 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.06□□□□□ -0.64
NEK1-206ENST00000510533 SLC30A1Q9Y6M5 507 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 OVOS2A0A0G2JMS6 1433 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 OVOS2A0A0J9YW53 1432 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 OVOS2Q6IE36 1432 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 ZC3H4Q9UPT8 1303 aaKnown RBP11.06□□□□□ -0.64
NEK1-206ENST00000510533 TRAPPC3O43617 180 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 EXTL3O43909 919 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 CAND2O75155 1236 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 FKBP9O95302 570 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PDGFRBP09619 1106 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 SMTNL2Q2TAL5 461 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 TRIM60Q495X7 471 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 FKBP9P1Q75LS8 142 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 TTC30AQ86WT1 665 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 SEPT1Q8WYJ6 367 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PNKPQ96T60 521 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 TEX13BQ9BXU2 312 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PABPC3Q9H361 631 aaKnown RBP11.06□□□□□ -0.64
NEK1-206ENST00000510533 SMARCAD1Q9H4L7 1026 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 L2HGDHQ9H9P8 463 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 ABCC3O15438 1527 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 DGKIO75912 1065 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 GTF2H1P32780 548 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 KCNK10P57789 538 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 SYTL3Q4VX76 610 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 WLSQ5T9L3 541 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 DEPDC1Q5TB30 811 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PLA2G4FQ68DD2 849 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 FAM71DQ8N9W8 422 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 LATS2Q9NRM7 1088 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 CD274Q9NZQ7 290 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 PRR12Q9ULL5 1215 aa11.06□□□□□ -0.64
NEK1-206ENST00000510533 NR3C2P08235 984 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 ACADSP16219 412 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 COPAP53621 1224 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 TKFCQ3LXA3 575 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 OLFML2BQ68BL8 750 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 ARID3BQ8IVW6 561 aaPredicted RBP11.05□□□□□ -0.64
NEK1-206ENST00000510533 OR6J1Q8NGC5 347 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 ZFYVE19Q96K21 471 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 RIT2Q99578 217 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 ZSWIM1Q9BR11 485 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 NIF3L1Q9GZT8 377 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 PKP3Q9Y446 797 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 M0R3G1 203 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 XPO1O14980 1071 aaKnown RBP11.05□□□□□ -0.64
NEK1-206ENST00000510533 ZBTB22O15209 634 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 RASA1P20936 1047 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 UBE3AQ05086 875 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 MAPK7Q13164 816 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 MTM1Q13496 603 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 NFIXQ14938 502 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 MROH9Q5TGP6 573 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 WDR93Q6P2C0 686 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 CYB5D1Q6P9G0 228 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 GJB7Q6PEY0 223 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 CLEC10AQ8IUN9 316 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 PRPF18Q99633 342 aaKnown RBP11.05□□□□□ -0.64
NEK1-206ENST00000510533 PLAGL2Q9UPG8 496 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 CD4P01730 458 aa11.05□□□□□ -0.64
NEK1-206ENST00000510533 GNL1P36915 607 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms