RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 BRD2P25440 801 aaKnown RBP18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 ZNF394Q53GI3 561 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 SH3D19Q5HYK7 790 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 IER5Q5VY09 327 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 CYB5D1Q6P9G0 228 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 SPOCD1Q6ZMY3 1216 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 ZBTB8OSQ8IWT0 167 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 CKAP2Q8WWK9 683 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 SEPT1Q8WYJ6 367 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 FAM167AQ96KS9 214 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 USP15Q9Y4E8 981 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 LCTP09848 1927 aa18.96■□□□□ 0.63
CCHCR1-228ENST00000509552 NDC80O14777 642 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 OGTO15294 1046 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 MSCO60682 206 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 SUN1O94901 812 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 STX2P32856 288 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 TCF7P36402 384 aaPredicted RBP18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 NUGGCQ68CJ6 796 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 GPAT2Q6NUI2 795 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 PRUNE1Q86TP1 453 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 ERICH1Q86X53 443 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 SRRM1Q8IYB3 904 aaKnown RBP18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 TCP11Q8WWU5 503 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 TTC25Q96NG3 672 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 PPP1R1BQ9UD71 204 aaPredicted RBP18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 DRG1Q9Y295 367 aaKnown RBP18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 TTLL13PA6NNM8 815 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 F8VP50 259 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 TCF4P15884 667 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 ARSEP51690 589 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 MKRN3Q13064 507 aaKnown RBP18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 CYP4F22Q6NT55 531 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 DEFB132Q7Z7B7 95 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 PARP9Q8IXQ6 854 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 CYP4X1Q8N118 509 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 ALLCQ8N6M5 410 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 ACO2Q99798 780 aaKnown RBP18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 SAYSD1Q9NPB0 183 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 FGFR1OP2Q9NVK5 253 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 SLC12A4Q9UP95 1085 aa18.95■□□□□ 0.62
CCHCR1-228ENST00000509552 FAM189A1O60320 539 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 PRKCBP05771 671 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 SRGAP2CP0DJJ0 459 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 TGFB3P10600 412 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 EIF4BP23588 611 aaKnown RBP18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 PTPN7P35236 360 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 ZNF252P-AS1Q0IIN9 211 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 MXD4Q14582 209 aaPredicted RBP18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 MAPK6Q16659 721 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 TFDP3Q5H9I0 405 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 SCARA3Q6AZY7 606 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 LBX2Q6XYB7 198 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 PPP1R21Q6ZMI0 780 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 GDAP1Q8TB36 358 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 FHDC1Q9C0D6 1143 aaPredicted RBP18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 MLXIPLQ9NP71 852 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 TPX2Q9ULW0 747 aaKnown RBP18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 PPP2R3BQ9Y5P8 575 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 TCRBV5S1A1TA0A578 114 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 CHUKO15111 745 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 OAS1P00973 400 aaKnown RBP18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 CETPP11597 493 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 GPS1Q13098 491 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 NR1H3Q13133 447 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 PRKG1Q13976 671 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 METTL7BQ6UX53 244 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 EXOC8Q8IYI6 725 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 PLCD4Q9BRC7 762 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 GGA3Q9NZ52 723 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 STRIP2Q9ULQ0 834 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 PCDHGC3Q9UN70 934 aa18.94■□□□□ 0.62
CCHCR1-228ENST00000509552 LOC285556D6RIA3 1793 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 EXOC1LA0A1B0GW35 172 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 FOXO6A8MYZ6 492 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 GAS2O43903 313 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 EDNRBP24530 442 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 YWHAEP62258 255 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 TFAMQ00059 246 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 LAMTOR4Q0VGL1 99 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 SNCBQ16143 134 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 ZNF699Q32M78 642 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 CDCA2Q69YH5 1023 aaPredicted RBP18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 RIOX2Q8IUF8 465 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 C2orf40Q9H1Z8 148 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.93■□□□□ 0.625e-30■■■■■ 28.6
CCHCR1-228ENST00000509552 LTBP3Q9NS15 1303 aa18.93■□□□□ 0.62
CCHCR1-228ENST00000509552 hCG_1818297A0A087WSY0 165 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 LRRD1A4D1F6 860 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 RASA4BC9J798 803 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 RASA4O43374 803 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 POLR2BP30876 1174 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 CDH5P33151 784 aaPredicted RBP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 VCPP55072 806 aaKnown RBP18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 PLCB3Q01970 1234 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 MPP2Q14168 576 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 MORF4L2Q15014 288 aa18.92■□□□□ 0.62
CCHCR1-228ENST00000509552 TMED2Q15363 201 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms