RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
KDM3B-206ENST00000509468 GJA1P17302 382 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 GARTP22102 1010 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 VIPR2P41587 438 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 AMPD3Q01432 767 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 GRM2Q14416 872 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 VEPH1Q14D04 833 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 STK38Q15208 465 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 TAF12Q16514 161 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 SLC39A12Q504Y0 691 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 ARHGAP15Q53QZ3 475 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 C1orf228Q6PIY5 440 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 VITQ6UXI7 678 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 STXBP4Q6ZWJ1 553 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 CCDC65Q8IXS2 484 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 DCP1BQ8IZD4 617 aaKnown RBP13.64□□□□□ -0.23
KDM3B-206ENST00000509468 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 ATRIPQ8WXE1 791 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 ZNF560Q96MR9 790 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 ZNF396Q96N95 335 aaPredicted RBP13.64□□□□□ -0.23
KDM3B-206ENST00000509468 USP28Q96RU2 1077 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 FAM213AQ9BRX8 229 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 DNAJC25Q9H1X3 360 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 CRISPLD1Q9H336 500 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 ATXN3LQ9H3M9 355 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 ZMYM5Q9UJ78 669 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
KDM3B-206ENST00000509468 PATJQ8NI35 1801 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 HEPACAM2A8MVW5 462 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
KDM3B-206ENST00000509468 TARSP26639 723 aaKnown RBP13.63□□□□□ -0.23
KDM3B-206ENST00000509468 WEE1P30291 646 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 NASPP49321 788 aaPredicted RBP13.63□□□□□ -0.23
KDM3B-206ENST00000509468 CSTF1Q05048 431 aaKnown RBP13.63□□□□□ -0.23
KDM3B-206ENST00000509468 KCNA1Q09470 495 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 PPP2R5DQ14738 602 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 MGAT5BQ3V5L5 792 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 WSCD1Q658N2 575 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 MAMSTRQ6ZN01 415 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 TMC8Q8IU68 726 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 MAML2Q8IZL2 1156 aaPredicted RBP13.63□□□□□ -0.23
KDM3B-206ENST00000509468 OR10T2Q8NGX3 314 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 SPPL2BQ8TCT7 592 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 CSGALNACT1Q8TDX6 532 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 MSANTD3Q96H12 275 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 TMEM209Q96SK2 561 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 R3HCC1Q9Y3T6 440 aaKnown RBP13.63□□□□□ -0.23
KDM3B-206ENST00000509468 CACNA1IQ9P0X4 2223 aa13.63□□□□□ -0.23
KDM3B-206ENST00000509468 TICRRQ7Z2Z1 1910 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 DPYSL4O14531 572 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 CHADO15335 359 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 EXTL3O43909 919 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 PPP6R2O75170 966 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 GABRR2P28476 465 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 TFAMQ00059 246 aaKnown RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 FZD5Q13467 585 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 NFE2Q16621 373 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 GAREM2Q75VX8 874 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 EFCAB13Q8IY85 973 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 LINC00301Q8NCQ3 95 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 FAM3CQ92520 227 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 SEPT5Q99719 369 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 IER2Q9BTL4 223 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 FAM126AQ9BYI3 521 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 IKZF4Q9H2S9 585 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 CUEDC2Q9H467 287 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 OBP2AQ9NY56 170 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 RBAKQ9NYW8 714 aaPredicted RBP13.62□□□□□ -0.23
KDM3B-206ENST00000509468 AGAP1Q9UPQ3 857 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 PCDHGA2Q9Y5H1 932 aa13.62□□□□□ -0.23
KDM3B-206ENST00000509468 SOBPA7XYQ1 873 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 SPTLC2O15270 562 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 HUS1O60921 280 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 HAPLN1P10915 354 aaPredicted RBP13.61□□□□□ -0.23
KDM3B-206ENST00000509468 CDC25CP30307 473 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 CASP5P51878 434 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 NRLP54845 237 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 RBP5P82980 135 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 FOXK2Q01167 660 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 TSPY1Q01534 308 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 FCHO2Q0JRZ9 810 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 SURF1Q15526 300 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 ARHGAP29Q52LW3 1261 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 GPR158Q5T848 1215 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 BRSK2Q8IWQ3 736 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 TMEM86AQ8N2M4 240 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 LRRC52Q8N7C0 313 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 PDILTQ8N807 584 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 RUBCNQ92622 972 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 GCNAQ96QF7 691 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms