RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MAN1C1Q9NR34 630 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 UBQLN1Q9UMX0 589 aaKnown RBP7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 L1RE1Q9UN81 338 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 COG5Q9UP83 839 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 C2CD2Q9Y426 696 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 COL4A2P08572 1712 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 NCOR1O75376 2440 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 PTPRDP23468 1912 aa7.8□□□□□ -1.16
TOPBP1-207ENST00000509162 NCANO14594 1321 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 AKAP3O75969 853 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 SEC24AO95486 1093 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 VNN1O95497 513 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 NR3C1P04150 777 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 ITGB3P05106 788 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 MYL1P05976 194 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 TRIM49P0CI25 452 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 TRIM49CP0CI26 452 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 POLR2BP30876 1174 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 PRCPP42785 496 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 NDUFV1P49821 464 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 AMPD3Q01432 767 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 KRT17Q04695 432 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 MORC3Q14149 939 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 PSMD6Q15008 389 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 SNRNP35Q16560 246 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 USP41Q3LFD5 358 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 COBLL1Q53SF7 1204 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 RARS2Q5T160 578 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 TDRD10Q5VZ19 366 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 SLFN12LQ6IEE8 588 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 PTCRAQ6ISU1 281 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 SLC8B1Q6J4K2 584 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 DCLRE1AQ6PJP8 1040 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 LIMS2Q7Z4I7 341 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 SYCP3Q8IZU3 236 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 CYP4X1Q8N118 509 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 GUF1Q8N442 669 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 MICAL1Q8TDZ2 1067 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 TMEM174Q8WUU8 243 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 KBTBD7Q8WVZ9 684 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 EEF2KMTQ96G04 330 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 MFSD14AQ96MC6 490 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 IPO9Q96P70 1041 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 CDCA3Q99618 268 aaPredicted RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 PKMYT1Q99640 499 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 CGRRF1Q99675 332 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 DUSP9Q99956 384 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 PYM1Q9BRP8 204 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 TTPALQ9BTX7 342 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 SDCBP2Q9H190 292 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 XYLT2Q9H1B5 865 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 POMKQ9H5K3 350 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 ASB7Q9H672 318 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 MRPL17Q9NRX2 175 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 INTS13Q9NVM9 706 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 CD207Q9UJ71 328 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 EXOC7Q9UPT5 735 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 TRAF3IP3Q9Y228 551 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 DERAQ9Y315 318 aa7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 MTCL1Q9Y4B5 1905 aaKnown RBP7.79□□□□□ -1.16
TOPBP1-207ENST00000509162 PRPF40AO75400 957 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 TADA2AO75478 443 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 AVPP01185 164 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 MCM4P33991 863 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 CA8P35219 290 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 LILRA4P59901 499 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 MCCD1P59942 119 aaPredicted RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 UBE2HP62256 183 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 CLDN10P78369 228 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 NTHL1P78549 312 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 MRPS5P82675 430 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 POU5F1Q01860 360 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 PPP3CAQ08209 521 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 SMAD2Q15796 467 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 NFIL3Q16649 462 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 ISM2Q6H9L7 571 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 PDE12Q6L8Q7 609 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 TMC5Q6UXY8 1006 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 C15orf39Q6ZRI6 1047 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 APBB1IPQ7Z5R6 666 aaPredicted RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 CEP57Q86XR8 500 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 SLC9A9Q8IVB4 645 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 GPR65Q8IYL9 337 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 ADSSL1Q8N142 457 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 XXYLT1Q8NBI6 393 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 STKLD1Q8NE28 680 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 BEST2Q8NFU1 509 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 NOC3LQ8WTT2 800 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 SENP8Q96LD8 212 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 LPIN3Q9BQK8 851 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 LRRC27Q9C0I9 530 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 DNAJC25Q9H1X3 360 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 SMOC2Q9H3U7 446 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 CLSTN2Q9H4D0 955 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 SLC38A7Q9NVC3 462 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 TMLHEQ9NVH6 421 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 DPP3Q9NY33 737 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 FNIP2Q9P278 1114 aa7.78□□□□□ -1.16
TOPBP1-207ENST00000509162 PUF60Q9UHX1 559 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms