RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 ZFYVE27Q5T4F4 411 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 GORABQ5T7V8 394 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 AGBL4Q5VU57 503 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 SPTY2D1Q68D10 685 aaPredicted RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 TRIM68Q6AZZ1 485 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 CCDC62Q6P9F0 684 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 PLEKHH3Q7Z736 793 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 RASSF3Q86WH2 238 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ERO1BQ86YB8 467 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 DZIP1Q86YF9 867 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ITPRIPQ8IWB1 547 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 FTSJ3Q8IY81 847 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 FAM43AQ8N2R8 423 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 OR14K1Q8NGZ2 314 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ZNF384Q8TF68 577 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 TGFBRAP1Q8WUH2 860 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 NSUN4Q96CB9 384 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 DYDC2Q96IM9 177 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 GPR108Q9NPR9 543 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 USP36Q9P275 1121 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ABCF2Q9UG63 623 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 MCM8Q9UJA3 840 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 EDARQ9UNE0 448 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ATP8A1Q9Y2Q0 1164 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 NOP58Q9Y2X3 529 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 NR2E1Q9Y466 385 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 SLC4A7Q9Y6M7 1214 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 FPGT-TNNI3KV9GXZ4 949 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 RFX7Q2KHR2 1363 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 ATRNL1Q5VV63 1379 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 LAMB1P07942 1786 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 CASP8AP2Q9UKL3 1982 aa4.22□□□□□ -1.73
UBE2D3-226ENST00000508635 MROH7-TTC4A0A0A0MT08 1334 aa4.21□□□□□ -1.73
UBE2D3-226ENST00000508635 MYPNQ86TC9 1320 aa4.21□□□□□ -1.73
UBE2D3-226ENST00000508635 AKAP11Q9UKA4 1901 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 A0A0A6YYJ9 748 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 NPEPPSL1A6NEC2 478 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 DDTLA6NHG4 134 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 GOLGA8AA7E2F4 631 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 GOLGA8BA8MQT2 603 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 BTBD19C9JJ37 291 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 OPHN1O60890 802 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 PRKD3O94806 890 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 CNOT4O95628 575 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 PLATP00750 562 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 LDHCP07864 332 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 MANFP55145 182 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 SOX10P56693 466 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 GSTO1P78417 241 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 SP3Q02447 781 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 PLP2Q04941 152 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 OS9Q13438 667 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 SNAPC2Q13487 334 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 SURF1Q15526 300 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 CCDC158Q5M9N0 1113 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 C20orf194Q5TEA3 1177 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 CEP85Q6P2H3 762 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 FBXO46Q6PJ61 603 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 USP30Q70CQ3 517 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 BMP8AQ7Z5Y6 402 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 SPATS2Q86XZ4 545 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 SCYL3Q8IZE3 742 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 EAF2Q96CJ1 260 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 ERO1AQ96HE7 468 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 GNRHR2Q96P88 292 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 LMF1Q96S06 567 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 DPYSL5Q9BPU6 564 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 OR10A2Q9H208 303 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 C12orf65Q9H3J6 166 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 TMX1Q9H3N1 280 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 CHMP4BQ9H444 224 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 PRDM12Q9H4Q4 367 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 ZCCHC17Q9NP64 241 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 DDX4Q9NQI0 724 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 POLR3BQ9NW08 1133 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 RAI14Q9P0K7 980 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 PPP4R1LQ9P1A2 415 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 KCNG1Q9UIX4 513 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 DBNLQ9UJU6 430 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 TRIM17Q9Y577 477 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 COL4A3BPQ9Y5P4 624 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 RBM8AQ9Y5S9 174 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 OTOFQ9HC10 1997 aa4.21□□□□□ -1.74
UBE2D3-226ENST00000508635 ARHGAP6O43182 974 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 TLR2O60603 784 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 MAFO75444 373 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 MAP4K4O95819 1239 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 PFKMP08237 780 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 CDK11BP21127 795 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 CDKN1CP49918 316 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 EPHB4P54760 987 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 RAC3P60763 192 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 ATP2C1P98194 919 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 PPARAQ07869 468 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 PICALMQ13492 652 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 TRIM25Q14258 630 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 TTC39AQ5SRH9 613 aa4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 RNF219Q5W0B1 726 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-226ENST00000508635 KLHDC10Q6PID8 442 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms