RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 MYOGP15173 224 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 CD19P15391 556 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 TYMPP19971 482 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 IGFBP6P24592 240 aaPredicted RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 BMPR1AP36894 532 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 AARSP49588 968 aaKnown RBP eCLIP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 NDST1P52848 882 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 TSPY1Q01534 308 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 YWHAHQ04917 246 aaPredicted RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 PTK2Q05397 1052 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 GOLGA8FQ08AF8 430 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 GOLGA8DPQ0D2H9 430 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 TBX2Q13207 712 aaPredicted RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 USP41Q3LFD5 358 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 SLC39A11Q8N1S5 342 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 SP7Q8TDD2 431 aaPredicted RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 SHC3Q92529 594 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 TNIP3Q96KP6 325 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 HEXIM2Q96MH2 286 aaKnown RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 TGS1Q96RS0 853 aaKnown RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 MRPL45Q9BRJ2 306 aaKnown RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 TTPALQ9BTX7 342 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 NT5C1AQ9BXI3 368 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 NAA15Q9BXJ9 866 aaKnown RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 TTYH3Q9C0H2 523 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 NKX2-4Q9H2Z4 354 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 SLC28A3Q9HAS3 691 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 MARCH5Q9NX47 278 aa11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 DDX43Q9NXZ2 648 aaKnown RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 AJAP1Q9UKB5 411 aaPredicted RBP11.77□□□□□ -0.53
BRCC3P1-201ENST00000508559 PDE4DIPQ5VU43 2346 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 CYP26A1O43174 497 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 URODP06132 367 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 PNMA6AP0CW24 399 aaPredicted RBP11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 TKTP29401 623 aaKnown RBP11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 PDE6CP51160 858 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 KLHL30Q0D2K2 578 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 ORC1Q13415 861 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 CTXN3Q4LDR2 81 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 PPP2R2DQ66LE6 453 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 ZNF280DQ6N043 979 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 DPY19L2P1Q6NXN4 242 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 DDX53Q86TM3 631 aaKnown RBP11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 UNC93AQ86WB7 457 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 KLHL23Q8NBE8 558 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 RIN2Q8WYP3 895 aaPredicted RBP11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 C11orf84Q9BUA3 381 aaPredicted RBP11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 PLVAPQ9BX97 442 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 GPR62Q9BZJ7 368 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 DEF6Q9H4E7 631 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 ABHD10Q9NUJ1 306 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 SEPT11Q9NVA2 429 aaKnown RBP11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 SCN1AP35498 2009 aa11.76□□□□□ -0.53
BRCC3P1-201ENST00000508559 C2CD2LO14523 706 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 THAP12O43422 761 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 MED7O43513 233 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 CILPO75339 1184 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 SOD2P04179 222 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 CYP11A1P05108 521 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 RB1P06400 928 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 GNA15P30679 374 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 PBX2P40425 430 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 GLUD2P49448 558 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 ARPP19P56211 112 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 JAM2P57087 298 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 INCA1Q0VD86 236 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 SGO2Q562F6 1265 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 CD300LGQ6UXG3 332 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 ANKS3Q6ZW76 656 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 TMC7Q7Z402 723 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 ACOT1Q86TX2 421 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 TMEM173Q86WV6 379 aaPredicted RBP11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 FAM71AQ8IYT1 594 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 VPS52Q8N1B4 723 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 BCL7CQ8WUZ0 217 aaPredicted RBP11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 BAP1Q92560 729 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 SYN2Q92777 582 aaPredicted RBP11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 TMEM176AQ96HP8 235 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 B3GALT6Q96L58 329 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 DNAJC7Q99615 494 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 SYT15Q9BQS2 421 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 C17orf80Q9BSJ5 609 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 HERC2P3Q9BVR0 1158 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 PBX4Q9BYU1 374 aa11.75□□□□□ -0.53
BRCC3P1-201ENST00000508559 ENTPD7Q9NQZ7 604 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms