RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 SENP8Q96LD8 212 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 TGS1Q96RS0 853 aaKnown RBP9.25□□□□□ -0.93
USP46-207ENST00000508499 CRACR2AQ9BSW2 395 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 C11orf84Q9BUA3 381 aaPredicted RBP9.25□□□□□ -0.93
USP46-207ENST00000508499 STK33Q9BYT3 514 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 IMPACTQ9P2X3 320 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 MSRAQ9UJ68 235 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 CAPN11Q9UMQ6 739 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 SSX2IPQ9Y2D8 614 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 PATJQ8NI35 1801 aa9.25□□□□□ -0.93
USP46-207ENST00000508499 LCHNA4D1U4 455 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 PES1O00541 588 aaKnown RBP9.24□□□□□ -0.93
USP46-207ENST00000508499 CYB561D2O14569 222 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 TBC1D4O60343 1298 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 HUS1O60921 280 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 LRRN2O75325 713 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 TADA2AO75478 443 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 CA3P07451 260 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 TRIM21P19474 475 aaKnown RBP9.24□□□□□ -0.93
USP46-207ENST00000508499 ACO1P21399 889 aaKnown RBP9.24□□□□□ -0.93
USP46-207ENST00000508499 HNRNPH3P31942 346 aaKnown RBP9.24□□□□□ -0.93
USP46-207ENST00000508499 ZNF132P52740 706 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 DSG1Q02413 1049 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 CREMQ03060 361 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 KRT17Q04695 432 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 MEA1Q16626 185 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 USP41Q3LFD5 358 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 FAM117BQ6P1L5 589 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 FUT10Q6P4F1 479 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 TMEM173Q86WV6 379 aaPredicted RBP9.24□□□□□ -0.93
USP46-207ENST00000508499 CRYBG2Q8N1P7 616 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 KBTBD7Q8WVZ9 684 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 PIK3R5Q8WYR1 880 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 TMEM169Q96HH4 297 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 PDLIM2Q96JY6 352 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 FAM84AQ96KN4 292 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 KREMEN1Q96MU8 473 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 HERC2P3Q9BVR0 1158 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 GPR62Q9BZJ7 368 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 DNAI2Q9GZS0 605 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 LMAN2LQ9H0V9 348 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 MMRN2Q9H8L6 949 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 KIAA1257Q9ULG3 409 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 BARX2Q9UMQ3 279 aaPredicted RBP9.24□□□□□ -0.93
USP46-207ENST00000508499 YBX2Q9Y2T7 364 aaKnown RBP9.24□□□□□ -0.93
USP46-207ENST00000508499 SNX9Q9Y5X1 595 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 BACE2Q9Y5Z0 518 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 CHD7Q9P2D1 2997 aa9.24□□□□□ -0.93
USP46-207ENST00000508499 F8VZ95 297 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 H3BNC9 293 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 LILRB3O75022 631 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 CILPO75339 1184 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 FGF18O76093 207 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 ADCY5O95622 1261 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 GYPCP04921 128 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 PAEPP09466 180 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 DNAJB2P25686 324 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 RABGGTBP53611 331 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 FOXK1P85037 733 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 ZBED6P86452 979 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 SMARCB1Q12824 385 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 IQCEQ6IPM2 695 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 ANKS3Q6ZW76 656 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 CNGA4Q8IV77 575 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 ARHGEF19Q8IW93 802 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 DRC7Q8IY82 874 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 FAM71AQ8IYT1 594 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 PPM1KQ8N3J5 372 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 PDCL2Q8N4E4 241 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 BCL7CQ8WUZ0 217 aaPredicted RBP9.23□□□□□ -0.93
USP46-207ENST00000508499 BAP1Q92560 729 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 TATDN2Q93075 761 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 ACBD6Q9BR61 282 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 PI4K2AQ9BTU6 479 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 LSM14BQ9BX40 385 aaKnown RBP9.23□□□□□ -0.93
USP46-207ENST00000508499 VN1R3Q9BXE9 311 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 GPR88Q9GZN0 384 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.23□□□□□ -0.93
USP46-207ENST00000508499 FAM207AQ9NSI2 230 aaPredicted RBP9.23□□□□□ -0.93
USP46-207ENST00000508499 AIPL1Q9NZN9 384 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 FNIP2Q9P278 1114 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 HSFX1Q9UBD0 423 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 DNAJC12Q9UKB3 198 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 MAFFQ9ULX9 164 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 L1RE1Q9UN81 338 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 STXBP5LQ9Y2K9 1186 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 PRG3Q9Y2Y8 225 aaPredicted RBP9.23□□□□□ -0.93
USP46-207ENST00000508499 GREB1Q4ZG55 1949 aa9.23□□□□□ -0.93
USP46-207ENST00000508499 GRXCR1A8MXD5 290 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 F8W810 466 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 H7C4K7 107 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 EPHB6O15197 1021 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 HRO43593 1189 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 SLC34A2O95436 690 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 CCDC172P0C7W6 258 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 CTSAP10619 480 aa9.22□□□□□ -0.93
USP46-207ENST00000508499 IBSPP21815 317 aaPredicted RBP9.22□□□□□ -0.93
USP46-207ENST00000508499 FECHP22830 423 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms