RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 SRRM1Q8IYB3 904 aaKnown RBP11.56□□□□□ -0.56
LIN54-207ENST00000508171 RCOR2Q8IZ40 523 aa11.56□□□□□ -0.56
LIN54-207ENST00000508171 CHST13Q8NET6 341 aa11.56□□□□□ -0.56
LIN54-207ENST00000508171 ZBTB10Q96DT7 871 aa11.56□□□□□ -0.56
LIN54-207ENST00000508171 EVPLQ92817 2033 aa11.56□□□□□ -0.56
LIN54-207ENST00000508171 SSC5DA1L4H1 1573 aa11.56□□□□□ -0.56
LIN54-207ENST00000508171 USP2O75604 605 aaPredicted RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 TOM1L1O75674 476 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 KRT1P04264 644 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 RFC5P40937 340 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 MAGEA4P43358 317 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 BAG6P46379 1132 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 TFAMQ00059 246 aaKnown RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 DCUN1D2Q6PH85 259 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 LBX2Q6XYB7 198 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 NCAPG2Q86XI2 1143 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 APOBEC3FQ8IUX4 373 aaKnown RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 FUKQ8N0W3 1084 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 RNF149Q8NC42 400 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 ACO2Q99798 780 aaKnown RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 SAE1Q9UBE0 346 aaPredicted RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 TJP2Q9UDY2 1190 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 SNX3O60493 162 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 LAMTOR4Q0VGL1 99 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 FASTKD3Q14CZ7 662 aaKnown RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 WDR72Q3MJ13 1102 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 HSDL1Q3SXM5 330 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 NUGGCQ68CJ6 796 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 DNAJC24Q6P3W2 148 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 ZPBP2Q6X784 338 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 WDR49Q8IV35 697 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 THNSL1Q8IYQ7 743 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 CD248Q9HCU0 757 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 ABCF3Q9NUQ8 709 aa11.55□□□□□ -0.56
LIN54-207ENST00000508171 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.55□□□□□ -0.56
LIN54-207ENST00000508171 WDR90Q96KV7 1748 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 TCEA3O75764 348 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ARIH2O95376 493 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ARSEP51690 589 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ITIH4Q14624 930 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 FAM133BQ5BKY9 247 aaKnown RBP11.54□□□□□ -0.56
LIN54-207ENST00000508171 SPOCD1Q6ZMY3 1216 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 CEP120Q8N960 986 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIN54-207ENST00000508171 TRAPPC12Q8WVT3 735 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 SEPT1Q8WYJ6 367 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 TMEM121Q9BTD3 319 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 MRPL4Q9BYD3 311 aaKnown RBP11.54□□□□□ -0.56
LIN54-207ENST00000508171 C10orf88Q9H8K7 445 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 SAYSD1Q9NPB0 183 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 PTPRFP10586 1907 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ZBTB42B2RXF5 422 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ABLIM1O14639 778 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 TJP3O95049 919 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 GHRP10912 638 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ATP5DP30049 168 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
LIN54-207ENST00000508171 GPS1Q13098 491 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 VGLL4Q14135 290 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 DUOXA2Q1HG44 320 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 SGSM1Q2NKQ1 1148 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 CYB5D1Q6P9G0 228 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 CAPN12Q6ZSI9 719 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 TRPM8Q7Z2W7 1104 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ERICH1Q86X53 443 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ZCCHC9Q8N567 271 aaKnown RBP11.54□□□□□ -0.56
LIN54-207ENST00000508171 TMEM35BQ8NCS4 154 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 BBOF1Q8ND07 529 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ADAM33Q9BZ11 813 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.54□□□□□ -0.56
LIN54-207ENST00000508171 NXF1Q9UBU9 619 aaKnown RBP11.54□□□□□ -0.56
LIN54-207ENST00000508171 MCM3APO60318 1980 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 ANK1P16157 1881 aa11.54□□□□□ -0.56
LIN54-207ENST00000508171 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 OGTO15294 1046 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 B4GALT5O43286 388 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CDH16O75309 829 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 CALB1P05937 261 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 PGK2P07205 417 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 PECAM1P16284 738 aaPredicted RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 GCAP28676 217 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 CETN2P41208 172 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 PLCB3Q01970 1234 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 ORC1Q13415 861 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 XRCC4Q13426 336 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 TRPC3Q13507 836 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 ZKSCAN8Q15776 578 aaPredicted RBP11.53□□□□□ -0.56
LIN54-207ENST00000508171 SMTNL2Q2TAL5 461 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 KCNT1Q5JUK3 1230 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 PPP1R15BQ5SWA1 713 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 FAM160B1Q5W0V3 765 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RHPN2Q8IUC4 686 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RELL1Q8IUW5 271 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 ALLCQ8N6M5 410 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 P3H4Q92791 437 aa11.53□□□□□ -0.56
LIN54-207ENST00000508171 RBM41Q96IZ5 413 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms