RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 E7ENQ6 273 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 GOLGA8RI6L899 631 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 C2CD2LO14523 706 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TRAFD1O14545 582 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 ALOX15BO15296 676 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 HLA-DRAP01903 254 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 ACO1P21399 889 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 PTPN4P29074 926 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 WDR72Q3MJ13 1102 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 SLC45A4Q5BKX6 768 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 RNASEH2BQ5TBB1 312 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 CC2D2BQ6DHV5 1058 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 PLEKHA7Q6IQ23 1121 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 LARGE2Q8N3Y3 721 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 CLEC4DQ8WXI8 215 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 PRR11Q96HE9 360 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 CADM1Q9BY67 442 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 PSMC3IPQ9P2W1 217 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 WDR81Q562E7 1941 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 CLUHO75153 1309 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 IFNB1P01574 187 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 SSTR1P30872 391 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 PSMC5P62195 406 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 ZNF252P-AS1Q0IIN9 211 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TDRD10Q5VZ19 366 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TMEM270Q6UE05 265 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 DSTYKQ6XUX3 929 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 CEP128Q6ZU80 1094 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 ZNF276Q8N554 614 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TAB3Q8N5C8 712 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 ZNF622Q969S3 477 aaKnown RBP eCLIP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 SYT15Q9BQS2 421 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TMEM121Q9BTD3 319 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TMX4Q9H1E5 349 aaPredicted RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 TLE6Q9H808 572 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 APOBEC3GQ9HC16 384 aaKnown RBP14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 ARL8BQ9NVJ2 186 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 SENP1Q9P0U3 644 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 USP21Q9UK80 565 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 IVNS1ABPQ9Y6Y0 642 aa14.16□□□□□ -0.14
SNCAIP-209ENST00000508017 MYCLP12524 364 aaPredicted RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 GLRA2P23416 452 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 MARK3P27448 753 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 GNA15P30679 374 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 ALDH1B1P30837 517 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 PIK3CAP42336 1068 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 RASSF2P50749 326 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 LMNB2Q03252 620 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 TFDP1Q14186 410 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 MORF4L2Q15014 288 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 MSS51Q4VC12 460 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 SCARA3Q6AZY7 606 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 C4orf50Q6ZRC1 276 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 APBB1IPQ7Z5R6 666 aaPredicted RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 ABRAQ8N0Z2 381 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 CPXCR1Q8N123 301 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 FEZF2Q8TBJ5 459 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 DNAJC9Q8WXX5 260 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 PTPRN2Q92932 1015 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 BICD1Q96G01 975 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 MRPL47Q9HD33 250 aaKnown RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 SLC17A7Q9P2U7 560 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 HERC5Q9UII4 1024 aaKnown RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 RABGEF1Q9UJ41 708 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 PCDHB4Q9Y5E5 795 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 ZC3H11AO75152 810 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 VNN1O95497 513 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 TNNI1P19237 187 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 OASLQ15646 514 aaKnown RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 AOC3Q16853 763 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 WDR44Q5JSH3 913 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 EFHC2Q5JST6 749 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 THEMIS2Q5TEJ8 643 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 ANKRD22Q5VYY1 191 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 CENPUQ71F23 418 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 NIPA1Q7RTP0 329 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 TAS1R3Q7RTX0 852 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 FAM160B2Q86V87 743 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 LMNTD2Q8IXW0 634 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 ZBTB10Q96DT7 871 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 MASTLQ96GX5 879 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 TAAR1Q96RJ0 339 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 NMRK1Q9NWW6 199 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 SAE1Q9UBE0 346 aaPredicted RBP14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 SLC24A2Q9UI40 661 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 LNPEPQ9UIQ6 1025 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 NFASCO94856 1347 aa14.15□□□□□ -0.14
SNCAIP-209ENST00000508017 A0A0G2JND7 137 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 F8VP50 259 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 SGK1O00141 431 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 ICAM1P05362 532 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 CAP2P40123 477 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 FKBP1AP62942 108 aaKnown RBP14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 OGDHQ02218 1023 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 FNBP1LQ5T0N5 605 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 FYB2Q5VWT5 728 aa14.14□□□□□ -0.15
SNCAIP-209ENST00000508017 SPOCD1Q6ZMY3 1216 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms