RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 STXBP2Q15833 593 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 DNAJC24Q6P3W2 148 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZBED8Q8IZ13 594 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 KIF2BQ8N4N8 673 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 TAB3Q8N5C8 712 aaPredicted RBP8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 RBM41Q96IZ5 413 aaKnown RBP8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 MAGEB18Q96M61 343 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 MTMR12Q9C0I1 747 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 C10orf88Q9H8K7 445 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 KIF9Q9HAQ2 790 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 AS3MTQ9HBK9 375 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 NOD2Q9HC29 1040 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 LGALS13Q9UHV8 139 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 STK38LQ9Y2H1 464 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 CNTNAP2Q9UHC6 1331 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 KIAA1217Q5T5P2 1943 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 FAM47DPA6NHR8 397 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 IGF2BP3O00425 579 aaKnown RBP eCLIP8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 BANF1O75531 89 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 PIAS1O75925 651 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 FOXN2P32314 431 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 COPS2P61201 443 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 NCALDP61601 193 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 TGFB2P61812 414 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 DYNLT1P63172 113 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 IL9RQ01113 521 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 OGDHQ02218 1023 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 MTM1Q13496 603 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 PRKG1Q13976 671 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 SMTNL2Q2TAL5 461 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 EAPPQ56P03 285 aaPredicted RBP8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZNF772Q68DY9 489 aaPredicted RBP8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 CGB2Q6NT52 195 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 GPAT2Q6NUI2 795 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 PPP1R21Q6ZMI0 780 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 SCARA5Q6ZMJ2 495 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 SPOCD1Q6ZMY3 1216 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 C4orf33Q8N1A6 199 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 PRPF31Q8WWY3 499 aaKnown RBP8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 MAML1Q92585 1016 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 RMDN2Q96LZ7 410 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 CISHQ9NSE2 258 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 GINM1Q9NU53 330 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 KLHL14Q9P2G3 628 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 TRIM33Q9UPN9 1127 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 CNTN6Q9UQ52 1028 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 FER1L6Q2WGJ9 1857 aa8.05□□□□□ -1.12
PPARGC1A-204ENST00000506055 ADGRA2Q96PE1 1338 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 DNALI1O14645 258 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 STAM2O75886 525 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 EZRP15311 586 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 NQO1P15559 274 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 TAC1P20366 129 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 GCAP28676 217 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 SLC8A1P32418 973 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 GMPSP49915 693 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 OAZ1P54368 228 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 WDR4P57081 412 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZNF280AP59817 542 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 OSTNP61366 133 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 TFAMQ00059 246 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 DNAJC3Q13217 504 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 CAPSQ13938 189 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 PKN2Q16513 984 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 WDR72Q3MJ13 1102 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 GALNTL6Q49A17 601 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 PREPLQ4J6C6 727 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 TFDP3Q5H9I0 405 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 KCNT1Q5JUK3 1230 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 DCAF15Q66K64 600 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 RELL1Q8IUW5 271 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ALLCQ8N6M5 410 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 GBP7Q8N8V2 638 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 SPOCK2Q92563 424 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 KLHL29Q96CT2 875 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZNF668Q96K58 619 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 NCAPGQ9BPX3 1015 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ZWILCHQ9H900 591 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 PIM2Q9P1W9 311 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 PPP1R1BQ9UD71 204 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ADAMTS5Q9UNA0 930 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 AGTPBP1Q9UPW5 1226 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 L3MBTL1Q9Y468 752 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 CFAP73A6NFT4 308 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ASS1P00966 412 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 CALB1P05937 261 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 RXRBP28702 533 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 RPA3P35244 121 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 GSCP56915 257 aaPredicted RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 MGAT5Q09328 741 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 BNIP1Q12981 228 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 MKRN3Q13064 507 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 PDIA2Q13087 525 aaKnown RBP8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 TRPC3Q13507 836 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 MTFR1Q15390 333 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 WLSQ5T9L3 541 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 CATSPERGQ6ZRH7 1159 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 EEPD1Q7L9B9 569 aa8.04□□□□□ -1.12
PPARGC1A-204ENST00000506055 ERICH1Q86X53 443 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms