RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 F8VP50 259 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 TRAFD1O14545 582 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ATP5HO75947 161 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 HLA-DRAP01903 254 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 C4BPAP04003 597 aaKnown RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 SSTR1P30872 391 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 OGDHQ02218 1023 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 TMEM270Q6UE05 265 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 NLRP9Q7RTR0 991 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ABRAQ8N0Z2 381 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 PTPRN2Q92932 1015 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 HAPLN2Q9GZV7 340 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 DCTN4Q9UJW0 460 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF541Q9H0D2 1346 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 PPP1R12AO14974 1030 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 DCTN3O75935 186 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ACOT2P49753 483 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 PDIA2Q13087 525 aaKnown RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 NR1H3Q13133 447 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 OASLQ15646 514 aaKnown RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ANKRD22Q5VYY1 191 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ENOSF1Q7L5Y1 443 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 NIPA1Q7RTP0 329 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 CLNKQ7Z7G1 428 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 KLF6Q99612 283 aaPredicted RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ALG13Q9NP73 1137 aaKnown RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 ZFATQ9P243 1243 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
UBE3D-206ENST00000505226 SMG5Q9UPR3 1016 aaKnown RBP12.55□□□□□ -0.4
UBE3D-206ENST00000505226 GOLGA8RI6L899 631 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 PLA2G6O60733 806 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 STBD1O95210 358 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 PDHA1P08559 390 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 NLRP11P59045 1033 aaKnown RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ZACNQ401N2 412 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 EAPPQ56P03 285 aaPredicted RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ZBTB41Q5SVQ8 909 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 FNBP1LQ5T0N5 605 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ZNF677Q86XU0 584 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 TRIM11Q96F44 468 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 CADM1Q9BY67 442 aaKnown RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 YIPF3Q9GZM5 350 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 TLE6Q9H808 572 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 SLC17A7Q9P2U7 560 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 NFASCO94856 1347 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 CNTNAP1P78357 1384 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 CLDN10P78369 228 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 TFDP1Q14186 410 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 PGM5Q15124 567 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 FAM160B2Q86V87 743 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 TAB3Q8N5C8 712 aaPredicted RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 FEZF2Q8TBJ5 459 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 MZB1Q8WU39 189 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 TIPINQ9BVW5 301 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ZFP69BQ9UJL9 534 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 C2CD2LO14523 706 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ZC3H11AO75152 810 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 GLRA2P23416 452 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 GDF10P55107 478 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 SLC45A4Q5BKX6 768 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 HHATQ5VTY9 493 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 PHF13Q86YI8 300 aaPredicted RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ARMC2Q8NEN0 867 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 NRG4Q8WWG1 115 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 SYT15Q9BQS2 421 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 FOXP3Q9BZS1 431 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 RAVER2Q9HCJ3 691 aaKnown RBP12.54□□□□□ -0.4
UBE3D-206ENST00000505226 XPNPEP1Q9NQW7 623 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 TBC1D22BQ9NU19 505 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ARL8BQ9NVJ2 186 aa12.54□□□□□ -0.4
UBE3D-206ENST00000505226 ATP4AP20648 1035 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 ATP6V1C1P21283 382 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 GNA15P30679 374 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 ALDH3A1P30838 453 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 PIK3CAP42336 1068 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 SAMD3Q8N6K7 520 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 GJD4Q96KN9 370 aaPredicted RBP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 TMEM39BQ9GZU3 492 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 ANKEF1Q9NU02 776 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 PCDHB4Q9Y5E5 795 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 TMEM191CA6NGB0 347 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 IFNB1P01574 187 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 KRT1P04264 644 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms