RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
TRIO-206ENST00000504606 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
TRIO-206ENST00000504606 BZW2Q9Y6E2 419 aaKnown RBP12.12□□□□□ -0.47
TRIO-206ENST00000504606 MRPL42Q9Y6G3 142 aaKnown RBP12.12□□□□□ -0.47
TRIO-206ENST00000504606 SSU72P8A0A1W2PR75 194 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 ARHGEF37A1IGU5 675 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 A8MXQ7 604 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 M0QZQ0 153 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 ARHGAP6O43182 974 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 TRAPPC3O43617 180 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 CALCAP01258 141 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 LAG3P18627 525 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 WARSP23381 471 aaKnown RBP12.11□□□□□ -0.47
TRIO-206ENST00000504606 GNA15P30679 374 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 CYLC1P35663 651 aaPredicted RBP12.11□□□□□ -0.47
TRIO-206ENST00000504606 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
TRIO-206ENST00000504606 RAD23BP54727 409 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
TRIO-206ENST00000504606 ORC1Q13415 861 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 MTF1Q14872 753 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 HS1BP3Q53T59 392 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 C9orf50Q5SZB4 431 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 RASIP1Q5U651 963 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 FUT10Q6P4F1 479 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 RAD9BQ6WBX8 426 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 ZNF571Q7Z3V5 609 aaPredicted RBP12.11□□□□□ -0.47
TRIO-206ENST00000504606 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
TRIO-206ENST00000504606 UNC93AQ86WB7 457 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 OSTM1Q86WC4 334 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 METTL23Q86XA0 190 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 TMEM86AQ8N2M4 240 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 EPS8L1Q8TE68 723 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 TMEM176AQ96HP8 235 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 RNPC3Q96LT9 517 aaKnown RBP12.11□□□□□ -0.47
TRIO-206ENST00000504606 CCDC42Q96M95 316 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 ZNF558Q96NG5 402 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRIO-206ENST00000504606 NT5C1AQ9BXI3 368 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
TRIO-206ENST00000504606 TSC2P49815 1807 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 THAP12O43422 761 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 HCRTO43612 131 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 TLL1O43897 1013 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 AKR1B10O60218 316 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 CYP11A1P05108 521 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 PAEPP09466 180 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 CD19P15391 556 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 TNFAIP3P21580 790 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 BRD2P25440 801 aaKnown RBP12.1□□□□□ -0.47
TRIO-206ENST00000504606 GNL1P36915 607 aaPredicted RBP12.1□□□□□ -0.47
TRIO-206ENST00000504606 KIF11P52732 1056 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 SHHQ15465 462 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 TAF3Q5VWG9 929 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 KCNT2Q6UVM3 1135 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 VPS36Q86VN1 386 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 TMEM173Q86WV6 379 aaPredicted RBP12.1□□□□□ -0.47
TRIO-206ENST00000504606 CCDC170Q8IYT3 715 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 SLC4A11Q8NBS3 891 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 SPATA18Q8TC71 538 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 SLC20A1Q8WUM9 679 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 RAD9AQ99638 391 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 AGPAT1Q99943 283 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 SEPT11Q9NVA2 429 aaKnown RBP12.1□□□□□ -0.47
TRIO-206ENST00000504606 DDX43Q9NXZ2 648 aaKnown RBP12.1□□□□□ -0.47
TRIO-206ENST00000504606 NOCTQ9UK39 431 aaKnown RBP12.1□□□□□ -0.47
TRIO-206ENST00000504606 DSEQ9UL01 958 aa12.1□□□□□ -0.47
TRIO-206ENST00000504606 EPN1Q9Y6I3 576 aaPredicted RBP12.1□□□□□ -0.47
TRIO-206ENST00000504606 SF3B1O75533 1304 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIO-206ENST00000504606 KIAA1671Q9BY89 1806 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 GABRDO14764 452 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 SYN3O14994 580 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 NDUFA10O95299 355 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 MMEP08473 750 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 PDGFRBP09619 1106 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 VDRP11473 427 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 TYMPP19971 482 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 ACAT1P24752 427 aaKnown RBP12.09□□□□□ -0.47
TRIO-206ENST00000504606 LMO2P25791 158 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 TKTP29401 623 aaKnown RBP12.09□□□□□ -0.47
TRIO-206ENST00000504606 LHX1P48742 406 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 CDR2Q01850 454 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
TRIO-206ENST00000504606 ELAVL2Q12926 359 aaKnown RBP12.09□□□□□ -0.47
TRIO-206ENST00000504606 FAM171A1Q5VUB5 890 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 ACOT1Q86TX2 421 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 ZNF677Q86XU0 584 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
TRIO-206ENST00000504606 LNX1Q8TBB1 728 aaPredicted RBP12.09□□□□□ -0.47
TRIO-206ENST00000504606 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
TRIO-206ENST00000504606 IGSF21Q96ID5 467 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms