RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RUVBL1Q9Y265 456 aaKnown RBP3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 ATP11BQ9Y2G3 1177 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 PCDHA3Q9Y5H8 950 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 ENTPD2Q9Y5L3 495 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 NR2E3Q9Y5X4 410 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 ACTL7AQ9Y615 435 aa3.09□□□□□ -1.91
HMGB1P35-201ENST00000503360 CCDC194A0A1B0GVG4 234 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 WDR91A4D1P6 747 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 A6NNZ2 444 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 WNT10BO00744 389 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 MGST3O14880 152 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLC16A6O15403 523 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 MYL1P05976 194 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 RAP2AP10114 183 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 ALOX15P16050 662 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 HTR1BP28222 390 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 CCKBRP32239 447 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 FLT3LGP49771 235 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 HK3P52790 923 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 ZNF280AP59817 542 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 ATP8B2P98198 1209 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 TLE1Q04724 770 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 NOGQ13253 232 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 SP140Q13342 867 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 MTM1Q13496 603 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 RAB39AQ14964 217 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 EZH2Q15910 746 aaKnown RBP3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 MAP9Q49MG5 647 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM47AQ5JRC9 791 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 MFSD14BQ5SR56 506 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 AFMIDQ63HM1 303 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 CCSAPQ6IQ19 270 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 C11orf87Q6NUJ2 197 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 PPP4R4Q6NUP7 873 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 CHST15Q7LFX5 561 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 DAAM2Q86T65 1068 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 XYLT1Q86Y38 959 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 MAPKAPK5Q8IW41 473 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 PDPRQ8NCN5 879 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 KLHDC4Q8TBB5 520 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 IFI44Q8TCB0 444 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 ACTRT2Q8TDY3 377 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 CASKIN2Q8WXE0 1202 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 TFAP2CQ92754 450 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 SARAFQ96BY9 339 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 CDK5RAP3Q96JB5 506 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 B3GNT5Q9BYG0 378 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 TMEM60Q9H2L4 133 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM204AQ9H8W3 233 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 ARMT1Q9H993 441 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 ARNT2Q9HBZ2 717 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 MOCS1Q9NZB8 636 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM30AQ9NZY2 134 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 CALCOCO1Q9P1Z2 691 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 DMTF1Q9Y222 760 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 POLHQ9Y253 713 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 STXBP5LQ9Y2K9 1186 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 USP15Q9Y4E8 981 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 NOX1Q9Y5S8 564 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 ATRNL1Q5VV63 1379 aa3.08□□□□□ -1.92
HMGB1P35-201ENST00000503360 CCDC151A5D8V7 595 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM227AF5H4B4 570 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 H3BUI4 141 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 TPP1O14773 563 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 MAP4K4O95819 1239 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 PRKCGP05129 697 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 TRIM27P14373 513 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 MALP21145 153 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 SMARCA1P28370 1054 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 ALDH1A3P47895 512 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 FOXG1P55316 489 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 CTXN1P60606 82 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 CREMQ03060 361 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 SNAPC2Q13487 334 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 GALEQ14376 348 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 ANO6Q4KMQ2 910 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 ANKS6Q68DC2 871 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 KIAA0895LQ68EN5 471 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 CYB5RLQ6IPT4 315 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 NPNTQ6UXI9 565 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 ZNF517Q6ZMY9 492 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 CCDC149Q6ZUS6 474 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 HEATR3Q7Z4Q2 680 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 SRGAP1Q7Z6B7 1085 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 LNX2Q8N448 690 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 FAM156AQ8NDB6 213 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 PLBD2Q8NHP8 589 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLC35B2Q8TB61 432 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 TTC17Q96AE7 1141 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 FCRL4Q96PJ5 515 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 MYOCQ99972 504 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 MRI1Q9BV20 369 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 SARGQ9BW04 601 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 PCGF6Q9BYE7 350 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 SEMA4CQ9C0C4 833 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 GALNT9Q9HCQ5 603 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 LMBRD1Q9NUN5 540 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 KLHL11Q9NVR0 708 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 PNPOQ9NVS9 261 aa3.07□□□□□ -1.92
HMGB1P35-201ENST00000503360 SLC52A1Q9NWF4 448 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms