RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ZNF699Q32M78 642 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 ZNF394Q53GI3 561 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 CELF3Q5SZQ8 465 aaKnown RBP17.52■□□□□ 0.4
VCAN-204ENST00000502527 HIBCHQ6NVY1 386 aaPredicted RBP17.52■□□□□ 0.4
VCAN-204ENST00000502527 MPZL3Q6UWV2 235 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 ERICH1Q86X53 443 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 LRRC71Q8N4P6 559 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 OSBPL7Q9BZF2 842 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 NSRP1Q9H0G5 558 aaKnown RBP17.52■□□□□ 0.4
VCAN-204ENST00000502527 KLHL11Q9NVR0 708 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 DDX56Q9NY93 547 aaKnown RBP17.52■□□□□ 0.4
VCAN-204ENST00000502527 IVNS1ABPQ9Y6Y0 642 aa17.52■□□□□ 0.4
VCAN-204ENST00000502527 ZBTB42B2RXF5 422 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 SLC25A27O95847 323 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 TNNC2P02585 160 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.39
VCAN-204ENST00000502527 PTPN7P35236 360 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 ZNF252P-AS1Q0IIN9 211 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 TFDP1Q14186 410 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 ATP13A4Q4VNC1 1196 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 PPP1R15BQ5SWA1 713 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 FBXW10Q5XX13 1052 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 KAZNQ674X7 775 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 MFSD7Q6UXD7 560 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 SPOCD1Q6ZMY3 1216 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 PIGWQ7Z7B1 504 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 CCDC13Q8IYE1 715 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 LRRC34Q8IZ02 419 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 ZCCHC9Q8N567 271 aaKnown RBP17.52■□□□□ 0.39
VCAN-204ENST00000502527 SAMD15Q9P1V8 674 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 A0A0G2JMZ2 1700 aa17.52■□□□□ 0.39
VCAN-204ENST00000502527 F8VP50 259 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 ACKR2O00590 384 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 ARIH2O95376 493 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 VIMP08670 466 aaKnown RBP17.51■□□□□ 0.39
VCAN-204ENST00000502527 HOXC6P09630 235 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 WEE2P0C1S8 567 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 KRT10P13645 584 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 PROZP22891 400 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 ITIH4Q14624 930 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 P3H1Q32P28 736 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 HSDL1Q3SXM5 330 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 LACTB2Q53H82 288 aaPredicted RBP17.51■□□□□ 0.39
VCAN-204ENST00000502527 EAPPQ56P03 285 aaPredicted RBP17.51■□□□□ 0.39
VCAN-204ENST00000502527 ANKRD20A8PQ5CZ79 823 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 RHPN2Q8IUC4 686 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 NIPA2Q8N8Q9 360 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 ANKRD36BP1Q96IX9 119 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 PWWP2AQ96N64 755 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 KDM4CQ9H3R0 1056 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 LGALS13Q9UHV8 139 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 STRIP2Q9ULQ0 834 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 ZNF148Q9UQR1 794 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 DRG1Q9Y295 367 aaKnown RBP17.51■□□□□ 0.39
VCAN-204ENST00000502527 B4GALT4O60513 344 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 TCF4P15884 667 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 ASPAP45381 313 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 IFNAR2P48551 515 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 STAT4Q14765 748 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 ATF7IP2Q5U623 682 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 THNSL1Q8IYQ7 743 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 WDTC1Q8N5D0 677 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 DYDC1Q8WWB3 177 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 TFAP2BQ92481 460 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 XYLT2Q9H1B5 865 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 PTPRHQ9HD43 1115 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 DNPEPQ9ULA0 475 aa17.51■□□□□ 0.39
VCAN-204ENST00000502527 A0A0G2JLL6 359 aaPredicted RBP17.5■□□□□ 0.39
VCAN-204ENST00000502527 TMEM120BA0PK00 339 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 SOCS7O14512 581 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 CDH16O75309 829 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 POLR2BP30876 1174 aaKnown RBP17.5■□□□□ 0.39
VCAN-204ENST00000502527 SLC26A2P50443 739 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 OGDHQ02218 1023 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 TMEM132AQ24JP5 1023 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 TFDP3Q5H9I0 405 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 SCARA5Q6ZMJ2 495 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 PRRT2Q7Z6L0 340 aaPredicted RBP17.5■□□□□ 0.39
VCAN-204ENST00000502527 ALLCQ8N6M5 410 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 CCT6BQ92526 530 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 RBM15Q96T37 977 aaKnown RBP eCLIP17.5■□□□□ 0.39
VCAN-204ENST00000502527 ASCC2Q9H1I8 757 aaPredicted RBP17.5■□□□□ 0.39
VCAN-204ENST00000502527 FZD8Q9H461 694 aa17.5■□□□□ 0.39
VCAN-204ENST00000502527 DNALI1O14645 258 aaPredicted RBP17.49■□□□□ 0.39
VCAN-204ENST00000502527 NDC80O14777 642 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 IRF6O14896 467 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 MED7O43513 233 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 CNMDO75829 334 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 ABHD2P08910 425 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 GHRP10912 638 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 MAGEA4P43358 317 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 LACTBP83111 547 aaPredicted RBP17.49■□□□□ 0.39
VCAN-204ENST00000502527 TAX1BP1Q86VP1 789 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 DHX37Q8IY37 1157 aaKnown RBP17.49■□□□□ 0.39
VCAN-204ENST00000502527 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 hCG_1818297A0A087WSY0 165 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 CCT8L1PA6NM43 557 aa17.49■□□□□ 0.39
VCAN-204ENST00000502527 INO80B-WBP1J3KQ70 363 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms