RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MSTNO14793 375 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 DYRK3O43781 588 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 CLASP2O75122 1294 aaKnown RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 PTP4A3O75365 173 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 MAFO75444 373 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 FSBPO95073 299 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 MTHFD2P13995 350 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 ALOX15P16050 662 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 KIF5BP33176 963 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 CD96P40200 585 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC6A11P48066 632 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 CTCFP49711 727 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 LGALS4P56470 323 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 IFI35P80217 286 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 BNIP3Q12983 259 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 CUL4AQ13619 759 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SMC1AQ14683 1233 aaKnown RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SEC23AQ15436 765 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 ATP2B3Q16720 1220 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 C3orf38Q5JPI3 329 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 FAM26FQ5R3K3 315 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 BTBD8Q5XKL5 378 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 TIGD7Q6NT04 549 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC30A6Q6NXT4 461 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 LCA5Q86VQ0 697 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 CHD1LQ86WJ1 897 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 TTC30AQ86WT1 665 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SIAH1Q8IUQ4 282 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SH2D3CQ8N5H7 860 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 TSPYL6Q8N831 410 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 NAT8LQ8N9F0 302 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 HIPK4Q8NE63 616 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 NLGN2Q8NFZ4 835 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 PLEKHO2Q8TD55 490 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 LINC01599Q8WXQ3 324 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 RGMAQ96B86 450 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 PEX11GQ96HA9 241 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 HIC2Q96JB3 615 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZC3H10Q96K80 434 aaKnown RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 JAKMIP1Q96N16 626 aaKnown RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 YME1L1Q96TA2 773 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 GPATCH1Q9BRR8 931 aaKnown RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 BRIP1Q9BX63 1249 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 ARHGAP39Q9C0H5 1083 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SENP6Q9GZR1 1112 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 ABCG4Q9H172 646 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 CDIP1Q9H305 208 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 MLXIPQ9HAP2 919 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 USP36Q9P275 1121 aaKnown RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 MYO1AQ9UBC5 1043 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 CPA4Q9UI42 421 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 MAFFQ9ULX9 164 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 PA2G4Q9UQ80 394 aaKnown RBP4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZNF281Q9Y2X9 895 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 SH3BP1Q9Y3L3 701 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 PCDHA13Q9Y5I0 950 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 NHSL1Q5SYE7 1610 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 ADGRB2O60241 1585 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 C1orf167Q5SNV9 1468 aa4.81□□□□□ -1.64
HMGB1P21-201ENST00000502313 MSH6P52701 1360 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 C17orf113A0A1B0GUU1 675 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 A0A1W2PPL8 197 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 H3BUI4 141 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 CHL1O00533 1208 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC27A2O14975 620 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 FOXP2O15409 715 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 APOL3O95236 402 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 AOAHP28039 575 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 HOXA10P31260 410 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 MC4RP32245 332 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 IL12RB1P42701 662 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 CCR5P51681 352 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 NKX6-1P78426 367 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 TMF1P82094 1093 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 HTRA4P83105 476 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 FOXO4P98177 505 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 DCTN1Q14203 1278 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 TRIM25Q14258 630 aaKnown RBP4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 RALGPS1Q5JS13 557 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZBTB41Q5SVQ8 909 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ACAD10Q6JQN1 1059 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 CNKSR3Q6P9H4 555 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ESPNLQ6ZVH7 1005 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 B4GALNT4Q76KP1 1039 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 CELF5Q8N6W0 485 aaKnown RBP4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 NETO2Q8NC67 525 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 WDR48Q8TAF3 677 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 SPPL3Q8TCT6 385 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 BCL7CQ8WUZ0 217 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 AFG1LQ8WV93 481 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZFPM2Q8WW38 1151 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ST8SIA4Q92187 359 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ASIC4Q96FT7 647 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 RAX2Q96IS3 184 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 C16orf92Q96LL3 132 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ACE2Q9BYF1 805 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 KCTD10Q9H3F6 313 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 DIAPH3Q9NSV4 1193 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 TMEM160Q9NX00 188 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 STK32BQ9NY57 414 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms